1. Home
  2. Mutant Lines
  3. ET13212

ET13212

CSHL Arabidopsis genetrap mutant lines

Original: ET13212

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13212

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17240155 [Map]; Strand: c
      • AT3G46810.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13212 - 3-prime edge 
    ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAGTTTT GAAAGGTTTA 
    AGAGGATGTT CATGCACCTT GTAATTCTCA ATACTAGAGA GTTGTGGCTG 
    AAGTGATACT GGTGGGGACT TCGCACAAAC CAAATGCATA CCAAAGTCAC 
    ATATCCAACA AAAATAACCA ATTCCCACCG GCCGTTCACA CAAATGACAA 
    CGTTGACGTC TATTGCCAAG CTTAAGCAGA TGCTTGGGAT GGGCATGGTG 
    GCTGATCTCG GGTTTGGACT CAGCGCACTC CTTATGGAAC ACCCCAAAAC 
    ACGCCAACTC ATTGCAACGG TAGCCTCCAT AAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17240052 [Map]; Strand: c
      • AT3G46810.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13212 - 5-prime edge 
    GCAGTGGCAA TTGCAAAGGG TGTAACTACA TTATCGGCAA TGGAGATAAC 
    GCTCCTTTTT ATGAATGTCG TCGGTGTAAA CTTTACATTC ACGTGACTTG 
    CCTTGAGCTC TTTTTCACCA CAGATGCACA CCACAACTCT CATCTCAAAC 
    ACCCTCTCAA ATATCTCAGA AATGGACACC CGAGTTACGC TGACCATAAA 
    TGCCTTCTTT GCGGAAGAGA GTTTGAAGAT CAACAAGGCC AAAAATATGA 
    GCTTTATCAC TGTGATGTTT GTAACTTCAG CATATGCATT TCTTGTCAAG 
    GAAACCCACC ACCACTAGTC GTTGTTACTC CGAAGACCCA CGAGCATCAA 
    CT

AT3G46810.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT3G46800.1); Has 1825 Blast hits to 696 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 0; Plants - 1753; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Link
InterPro Scan - TAIR