1. Home
  2. Mutant Lines
  3. ET13217

ET13217

CSHL Arabidopsis genetrap mutant lines

Original: ET13217

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13217

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7514181 [Map]; Strand: c
      • AT1G21460.1 - [+] show detail - Nodulin MtN3 family protein
        Distance: -820; Region: promoter
    Flanking Genome Sequence: ET13217 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTACTTTTTA 
    GTATAGTGAG TGATCTTTTT GGAATGTTTT CTAGTCACCA CGAGTTAGCT 
    TATTCAGCTT TACCCAAACC ATATCGGTTC ATTCATGATC ATTTTAAACG 
    GAGTAAAACC AACAAAAAGA ACATTAGGTT ATGATTGTGA GGCTAAGGTT 
    AATGGATCAA CGTCGGTAGA TGAGTTGATT ATTGAAGATG ACCAAATTTG 
    TTGAATTTTT TTTTTTTGGG GAAAAAAACC TGAAATTGGG GGGTCCCCGC 
    GAACGGGTCC TTTATATTTT TTAAAAACGA ATAGTCAAAA AAAAAATTTT 
    ACCTTTGTCC CCAGTTTTTA CCTAAATTCC AAAAACCTTC CAAAAGCCCC 
    CGGAAAACCA AATTAAGTTT AGAAACCCGT TTTCCTCCAA AGGGAAAATT 
    TTTTTAAACC CTTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3300785 [Map]; Strand: c
      • AT3G10560.1 - [+] show detail - Cytochrome P450 superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13217 - 3-prime edge 
    TTTACCGACC GTTACCTACC GTTTTCTTCC CTACGCAACG GTATCGTCCT 
    TCTCGTATCT TGATACACTC TTTGATCTTA

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 15563058 [Map]; Strand: c
      • AT5G38870.1 - [+] show detail - transposable element gene
        Distance: 936; Region: intergenic
      • AT5G38880.1 - [+] show detail - unknown protein; Has 474 Blast hits to 433 proteins in 138 species: Archae - ...
        Distance: 248; Region: intergenic
    Flanking Genome Sequence: ET13217 - 5-prime edge 
    CCTACTTTAT CCCTGCCCTT TATTTCAGGT CCATTAGCCA TAAAATGGAA 
    CCACACCGGA AGAATTATGT CAGGAATATT AGTTGTTACC AAACCCAAAT 
    TTAATTAGAA TACATTTTTC AAGCTATGTA GTAGTAGTAA CTAATTTTTT 
    GATTACGTGT AAAATTCAAA GATCAATTTT CAGAAACTGG AATACTTGTT 
    ATTTAGTAAC TATATCATAA ACAATGTGAT AAATACCAAG ATTTTGTTAT 
    TTTGTTTATC GTCTTCCAAA TTCTGAAAAC AATAATGGCG AATCACGAGA 
    CAGAAAGGAA CAAAATAGCT TTTTGAAGAA GCATGGTTAT GTCTTATAAT 
    TTCAGAGACA AAACAAAAAC CACTTTCAAC TCGAAAACAG AGCTCCAAAA 
    TGTCTTCTCT T

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3300697 [Map]; Strand: c
      • AT3G10560.1 - [+] show detail - Cytochrome P450 superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13217 - 5-prime edge 
    CCTACTTTCG TCGCCTTCCG TCGTTTCTCG ATGAATCCGA CGACGAAATC 
    TACAAGTTCC CGACGAAGCT TAAGAGCACG ATTTCTCTCA TTGTAGTTAA 
    ACGGCGTTAA GATCGGAAGG TAATCGTGGA GTTTTGGATC AACGGCGTTT 
    AATATCGCCG TCATCAACTG ATCCATCTTC TCAATTGATT CCTCTTTCAT 
    CTCACTCGAC AAACAGATAT CTAATAAAAC ACAAAACGCA GCGTATCTGC 
    TGTTTTGCAG AACCCAGACG AGTCCATCGT TGTCTCTAGC TTCAGATTTG 
    ATTCTCTCGA TGAGTTTATC CATGGCGGAT TTTCTAACAG AACCAAACTC 
    CTTGAGCCGA TTCGAGCTAA GCATGTTCTG AACCATGTTC CGTCTCAATG 
    ACCTCCACAC AGGTCCATAC ATAGCGGAAT GAACTGTGAT TTCACTGGAG 
    CTGAAGATTT TCCGGGTCGG AGTTTCAACG GGTCGGGTCG CGAATTGTGC 
    TCCACGTTCG ATTAACGCTT CGTGGGCGAG ACTGGCGTCG GAGATGATGA 
    TCATTGTTC

AT1G21460.1

Model type
Protein coding
Short Description
Nodulin MtN3 family protein
Computational Description
Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT5G53190.1); Has 988 Blast hits to 930 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 221; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G10560.1

Model type
Protein coding
Short Description
Cytochrome P450 superfamily protein
Curator Summary
member of CYP77A
Computational Description
UNFERTILIZED EMBRYO SAC 9 (UNE9); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: double fertilization forming a zygote and endosperm, pollen tube development; LOCATED IN: endomembrane system; EXPRESSED IN: central cell, embryo, sperm cell, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 77, subfamily A, polypeptide 9 (TAIR:AT5G04630.1); Has 33598 Blast hits to 33350 proteins in 1733 species: Archae - 49; Bacteria - 4240; Metazoa - 11965; Fungi - 6662; Plants - 9437; Viruses - 6; Other Eukaryotes - 1239 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G38870.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, hypothetical protein
Link
InterPro Scan - TAIR

AT5G38880.1

Model type
Protein coding
Computational Description
unknown protein; Has 474 Blast hits to 433 proteins in 138 species: Archae - 6; Bacteria - 80; Metazoa - 195; Fungi - 44; Plants - 59; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink).
Link
InterPro Scan - TAIR