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ET13237

CSHL Arabidopsis genetrap mutant lines

Original: ET13237

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET13237

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 15967669 [Map]; Strand: c
      • AT5G39865.1 - [+] show detail - Glutaredoxin family protein
        Distance: -496; Region: promoter
    Flanking Genome Sequence: ET13237 - 3-prime edge
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAG ACCATTTCAT 
    GATAGAATTT TGTATACAAC TCACAATAAA AAATTACTCC TTTAAACAGA
    GCAATGCAAG TGAGAATAAA ACCCAATAAC TTGCATACTT AACCTGATTA
    CCTGAAGAAC TTACAAATTT AGAATAATAG TTTTTTTTTT T
  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 15967597 [Map]; Strand: c
      • AT5G39865.1 - [+] show detail - Glutaredoxin family protein
        Distance: -424; Region: promoter
    Flanking Genome Sequence: ET13237 - 5-prime edge
    TCCTACTTTC TCCGTGAGGA TTGGCTATGA TAATCAATTA GTCATTTTCC 
    GAATAAAATG TAAAATTTGT TCAAAAAGAA CATTTTGTGC AATGAATGCA
    GCTTGTTTAA AAGATTGCTA TGACTATTTT TGAAGCTGAT TATTTTTTTT
    AAGTTGTTTT AAAAAAAAAA ATAAATTACC TAGTTTCAAA CCTCCCCATC
    GTTTTATCAA ATCAAACATC CCCCATGCCT CAAATCAAAT CGTTGAAATT
    CTACAACTGA GGACTTGCTT GTCTATGACC TGGGAAAGCT AAAAATTTGC
    CATGGGGTGG GGACCTTTAG TAAAAGCCAA GTACCTTATG AGTTTGGGCA
    TCCCCAAATC TCTACGGAGG GGGGACCCTC TAAAAAAGGA CTTCGCCAAG
    GAAAAGTCAA AATTATTTTT TAAAAAAGGG AAAAAAAAAT CTTCCAAATT
    TTAAAAATTA AATTCTCTTT CAAGGCACAA AATTCCCCAT CCCTCTCTTT
    CCCTAAACAA CTTTTTAAAA AAAAAGTAGG CCCT

AT5G39865.1

Model type
Protein coding
Short Description
Glutaredoxin family protein
Computational Description
Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: N-terminal protein myristoylation, cell redox homeostasis; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT3G28850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR