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ET13242

CSHL Arabidopsis genetrap mutant lines

Original: ET13242

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13242

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 333846 [Map]; Strand: w
      • AT3G02000.1 - [+] show detail - Thioredoxin superfamily protein
        Distance: -824; Region: promoter
    Flanking Genome Sequence: ET13242 - 3-prime edge
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAGCCA AAAGCATGTC 
    ACAAACTACA AACTTTGTAA ACTTTGAAGA AAAAAAAAAA TCAGGTTTTT
    TCTATATAAA ATTGTCCAAA TTCTAATATT GTTATAATTA AACCCTTCCA
    AATTAATTCA TGGGGGCTGT TCTTATAAAA TATGTACCCT TCATAATTCC
    CGAGCCATAA TTCTTTTTCT ATATATATAA GGGGGATGCT TTTATTCTGG
    ATAAAAAACA TAAAATTCTG ACTCCTTAAC AAATTATGAT GGGATGATTA
    CCCATTTGCT GGATTGATGA TTACTCGGCC GTATGGAATT ATATTTTTTC
    CAGAGTAAAA TGGAATAAAA AAAAACCCCC CCCAAAATCC TTTTTGTACA
    AATTGAAGGA GCTTTTCTCC GGGGAAATTA TGGTTTCTTC CTTTATGACC
    ATGTATCTGA AAATCCAAGG AAGGAAAAAG AGAGATTTAG GTGGTAAAAA
    AATTAATGGT GAGAGCGGTA AAACCCCACA AAAAGG

AT3G02000.1

Model type
Protein coding
Short Description
Thioredoxin superfamily protein
Curator Summary
Roxy1 encodes a glutaredoxin belonging to a subgroup specific to higher plants. It is required for proper petal initiation and organogenesis. It is likely to function in the temporal and spatial expression regulation of AGAMOUS in the first and second whorl. It's function is dependent on the Cysteine 49 residue and its nuclear localization. ROXY1 interacts in vitro and in vivo with members of the TGA family of transcription factors (e.g. TGA2, TGA3, TGA7 and PAN).
Computational Description
ROXY1; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT5G14070.1); Has 1149 Blast hits to 1147 proteins in 188 species: Archae - 0; Bacteria - 38; Metazoa - 213; Fungi - 109; Plants - 748; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).
Link
InterPro Scan - TAIR