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ET13256

CSHL Arabidopsis genetrap mutant lines

Original: ET13256

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13256

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1129435 [Map]; Strand: c
      • AT2G03710.1 - [+] show detail - K-box region and MADS-box transcription factor family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT2G03710.2 - [+] show detail - K-box region and MADS-box transcription factor family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT2G03710.3 - [+] show detail - K-box region and MADS-box transcription factor family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET13256 - 5-prime edge 
    CCTACTTTCT CCCTGGTATA AGTAAATGTG TAGAGTGTAT ATATAGATCT 
    TGTCTCAAAA GGATTCTGGT TCTTAATCTA GGGCATGAAT TGGTTTCCGG 
    TGACTAGGTG GTGGTGGTGG AGGAGGAGAT TGTGGTAGTG GTGGTGGTGG 
    GCCAACTGTG TTCAGGTTCT TCTTTTGTTG AACTGATTTT TAAGAGAATA 
    TAGCTTTGTG TTGGTTTTGC AGAGATGCTA AGCCATTCTT GGCCAAATAA 
    ATGCTTCCAA ACTTATATCC AATCTTATAA ACTTTCCTTT TTAAAAAATT 
    AATATAAAAT ATTATAAATT CTAAAAAGTA TTTTTGTGTA GTTACATTAT 
    TTTAGTCTTA CTTCATCAGG GAATATATAT TATTATTAAT TTTCTTTTAC 
    ACTTTTGTTT TTGCAGAAAA TAAAAATTGA TTCCTAGTAC TTTTCTAAGG 
    AGAGTTAAGA TCTTTTTTTC TCTCTCTCTA TA

AT2G03710.1

Model type
Protein coding
Short Description
K-box region and MADS-box transcription factor family protein
Curator Summary
This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity.
Computational Description
SEPALLATA 4 (SEP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7361 Blast hits to 7360 proteins in 917 species: Archae - 0; Bacteria - 4; Metazoa - 643; Fungi - 310; Plants - 6307; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G03710.2

Model type
Protein coding
Short Description
K-box region and MADS-box transcription factor family protein
Curator Summary
This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity.
Computational Description
SEPALLATA 4 (SEP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7369 Blast hits to 7368 proteins in 921 species: Archae - 0; Bacteria - 4; Metazoa - 645; Fungi - 306; Plants - 6326; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G03710.3

Model type
Protein coding
Short Description
K-box region and MADS-box transcription factor family protein
Curator Summary
This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity.
Computational Description
SEPALLATA 4 (SEP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR