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ET13270

CSHL Arabidopsis genetrap mutant lines

Original: ET13270

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13270

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 16740678 [Map]; Strand: w
      • AT5G41820.1 - [+] show detail - RAB geranylgeranyl transferase alpha subunit 2
        Distance: -126; Region: promoter
    Flanking Genome Sequence: ET13270 - 5-prime edge 
    TACTTTCTCC CTGACAATGT GTTTACAAAA AACAAGAAAG CATGTTCGTA 
    ATTTTCAATT GAACCGGTAT CGTAATTTTT GATTAAACTC GGTTTACTCG 
    TACCGGTTCC TTTATCTATT TATTGTTGTT TTTAGGTTTC CGGTGGGAAC 
    CCTAAACAAG AAAACGTCAT TGTGAAGCAA TTCCCTATAT CTCAATGCAC 
    GGTCGTAAGA GAGAGGAGGA TCCGAATCCA GAGGAGACCG CAGCTAAAGC 
    CCTGGAGCTC CGGTCCCTCC AGTCCC

AT5G41820.1

Model type
Protein coding
Short Description
RAB geranylgeranyl transferase alpha subunit 2
Computational Description
RAB geranylgeranyl transferase alpha subunit 2 (RGTA2); FUNCTIONS IN: protein prenyltransferase activity; INVOLVED IN: protein amino acid prenylation; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611), Protein prenyltransferase (InterPro:IPR008940), Protein prenyltransferase, alpha subunit (InterPro:IPR002088); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase alpha subunit 1 (TAIR:AT4G24490.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR