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Mutant Lines
ET13304

ET13304

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal (unconfirmed)

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: ET13304

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 2; Position: 18787793 [Map]; Strand: c
- AT2G45590.1 - [+] show detail - Protein kinase superfamily protein
  Distance: 0; Region: exon1 (CDS)

TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGTTTTG ACGGATACTG 
GATTGTCACC GGAAAGTAGC AAGCTTAAAG TGGGATCGAA GAGAGATTGG 
TGGTGGAAAC AGGACAACAA TGGTGGAAGC AGAGGAGGGA TTGAATCAGG 
GAGTGTGAAG GATTACGTGA TGGAATGGAT TGGGAGTGAG ATTAAGAAAG 
AGAGACCTAG CAACAATAAG GAATGGATCA ACAATGGTGA TGGGTCATCA 
TCAGTCTCTA AGAAGAAGAA GAAAGAGAAG AAGAGAAAGC CTAGAGAGTG 
GTGGAAGGAA GAGTTTTGTG AAGAGCTGAC TAGAAAGAAG AGGAAAAAGA 
AGAAGAAGAA GAAAAGAGGG TTAAGCTCAA TCTCAAGCAT TGACTCTTGG 
TTTCATAGAG ACGATGGTGC TTCCTCTGTT CATGACCACA ATCTTAATCC 
TACCAAGAGG AAGAAGAGGA ATAGTATAGA TTGGTGGGTA GATGGGTTA

3 prime edge [+] show sequence

Chromosome: 2; Position: 18787780 [Map]; Strand: c
- AT2G45590.1 - [+] show detail - Protein kinase superfamily protein
  Distance: 0; Region: exon1 (CDS)

AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGTT 
TTGACGGATA CTGGATTGTC ACCGGAAAGT AGCAAGCTTA AAGTGGGATC 
GAAGAGAGAT TGGTGGTGGA AACAGGACAA CAATGGTGGA AGCAGAGGAG 
GGATTGAATC AGGGAGTGTG AAGGATTACG TGATGGAATG GATTGGGAGT 
GAGATTAAGA AAGAGAGACC TAGCAACAAT AAGGAATGGA TCAACAATGG 
TGATGGGTCA TCATCAGTCT CTAAGAAGAA GAAGAAAGAG AAGAAGAGAA 
AGCCTAGAGA GTGGTGGAAG GAAGAGTTTT GTGAAGAGCT GACTAGAAAG 
AAGAGGAAAA AGAAGAAGAA GAAGAAAAGA GGGTTAAGCT CAATCTCAAG 
CATTGACTCT TGGTTTCATA GAGACGATGG TGCTTCCTCT GTTCATGACC 
ACAATCTTAA TCCTACCAAG AGGAAGAAGA GGAATAGTAT AGATTGGTGG 
GTAGATGGNN GTTAAGTGGG GAGCTGAAGT CAGTCATGGG TAAAAAAAAC 
AGTCAAGATT CTGGTTTGTG GTGTGATGTG AATGTTCAGA AGAGTGGTGG 
AGTCAGCAGC ACACCGAGTA TGAGAGGTAC GGTGTGTTAC ATTGCACCAG 
AATGTGGAGG AGGAGGTGTG TTGTCTGAGA AATGCGATGT

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 16839063 [Map]; Strand: w
  - AT4G35440.1 - [+] show detail - chloride channel E
    Distance: 0; Region: exon1 (CDS)
  - AT4G35440.2 - [+] show detail - chloride channel E
    Distance: 0; Region: exon1 (CDS)
  - AT4G35450.5 - [+] show detail - ankyrin repeat-containing protein 2
    Distance: -469; Region: promoter
  - AT4G35450.1 - [+] show detail - ankyrin repeat-containing protein 2
    Distance: -482; Region: promoter
  - AT4G35450.3 - [+] show detail - ankyrin repeat-containing protein 2
    Distance: -606; Region: promoter
  - AT4G35450.2 - [+] show detail - ankyrin repeat-containing protein 2
    Distance: -624; Region: promoter
  - AT4G35450.4 - [+] show detail - ankyrin repeat-containing protein 2
    Distance: -865; Region: promoter
Flanking Genome Sequence: ET13304 - 5-prime edge
```
CTCAGCCACA CAAGCTCCAC GATCAGGAAT CCCATCCCAG GAAAAGTCTC 
GAAGCAAGTG AACACAGTTG TTGAATAGAA CCACACTAAC TCCAGTGAGA 
ACACCAACCA AACAAGCCGA CGCTATCGCA AGCTCCTGAG ACGGCTGCTG 
ATCAAATCCA ACCTCATCCT GATCAGTCTC CTGCTTCGCC GCCGGTAAAC 
GCGGGAAAAT TCTACCGCCA ATAGCGACGG AACCGAAAAA CGGTGAAAGG 
ACGACATTGA ACTGAAAAGG AACGTCGGTT TTGTGAATTG GAGCGAATCT 
CCGGGAAGAG ACGGGAGATC GGAGGGCAGC ACAGAGTGGA AGCGTGGCTG 
CCATGAACGG CTGCTTCCGT GAAGTGACGC GTGTTTATCC ATTAACGGAT 
AATTGATCTT AAATCACAAA TCTTACGTGG CTGATCTTAT TATTCAAACG 
CATGGGCTTG GGCCTTGAGG TAAACAGGTT TATATGGGCC AATAACAATA 
AATTTGATTA AAAATAAAAG GCCTCTTAGC TTTAGGTTCA AACTTCAATG 
GAGAAGCAGT GGCTGTTGTC CCTCGCAG
```

5 prime edge [+] show sequence

Chromosome: 4; Position: 12505 [Map]; Strand: c
- AT4G00026.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
  Distance: 0; Region: intron4 (CDS)

TAAGGTGTTT CTTCCTACAA GTTTCTACTT AATGTCTACG TTATGTGTTT 
GCCATTTATC ACAACGCAAG CCGTCAAAAG CGACAGACAG CTTCTGTCAT 
CTAATAATGA TGCTTGCTTT GTGCCAATTG TTTTACAGGC TAAGAAAGAG 
GTGACGACTG TGGAGGATCC TTTTGATTCT CCTACATACC ACATCCCGGA 
GAAGCCGGTG ACCTTTACAG AAGGTGCGTC CTACAGTCTT GTTATTCTGG 
CTGGGCTTGG TGTCGCTGGA GCTGCTGGCT ACGGTGTGTT TAAAGAGCTC 
ATTTTTCAAC CAAAAGAGTG AGGCTTCAGA AATCTAATTT GATTTATCTG 
CTCAGACACT TGGATTTGAG TAATCTAAAG ACACCATTCT GTATTCTAGG 
TACAAGGTCT TTGACAAAGC CTTGAAGAGA ATTCAAGATG ATGGTCAGGT 
AATTAGAAAC TAACTCTACA GATTGATCAT AGCGGAGGGG TGGTGTATGA 
AACAAAAGCA TCTGTTTATA AAATGAAACA ATTTCTGTGA CTGTGATTGT 
CTTGTTAACT AGGTGAGGGT TAGGATTGGA TCCCCCATCA AAGGCTATGG 
ACAAGAAACT AGAAACCGAG CTGCTCGTCA ACGTATACCC AACAGAGTAT 
TTACAGATGA AGACGGAGTG GAGCATGTTG AGGTATTTCA TTGTAGAACC 
TCTATTGCGC TTGGATTCAC ATTCTTGCTA TATAAATTGT CTAGAGTTTT 
GCAGGTTTAA CATGATCAAA ATTGATATGC TTCAGG

5 prime edge [+] show sequence

Chromosome: 3; Position: 16401024 [Map]; Strand: c
- AT3G44920.1 - [+] show detail - cation/H+ exchanger 11
  Distance: -1299; Region: intergenic
- AT3G44930.1 - [+] show detail - cation/H+ exchanger 10
  Distance: 1034; Region: intergenic

CTTTCTCCCT GTTGTTGATA ATGAGGCAAA ATCAGAAATA TCATAGGAGC 
TGGGATCAGG AGTCGAAAGA TGAGATTCTC TCTCCATCTT CTATATCTCG 
CTAAGGTTTC TGTTCAAAGT TTGATAGTCA TCCTTTTAAC CCACTTAATA 
ATCTCTTAGA AAACAAGCAG CCCTAACTTG AGCCACAATA CAACGTCTAG 
GGTTCATCCG TCTTCACGCA ACCCCAATAT GCCTCTACAG CTCTACTCAT 
CCTTCTAACC CACTTAATAA TCTCTTAGAA AACAAGCAAC CCTAACTTGG 
GCCACAATTC AACGTCTAGG ATTCATCCGT CTTCAATATG CCTCTACTCC 
CTTGCCGATC CAGTCGTGGG CCTCGTGGCC ATCTAGAGTC TAGACACACA 
AATGCATTAA ATTTGAAAAG AAAAATCACA CAAAAAGACA TCCATTAGAA 
AATCAAACAC ATCACGTTAT TGTGCACAGC ACATTGACAT ATATATCTGT 
CTGTGCCTTC CTCTTTCGCA TATGATTGAC GTCTCCTTCT CATCTCATTC 
ACATCTTCGT AGGTTCAGAT TGAGATTGAT CTAAAGATCT AAACCTAAGC 
AAAAGGATTC CAAATCAGCT CAACTTAGTT GCGACTCGAG GAGCTACGAG 
AAGAACTCGG TTTCCTTCTC GGCTGCTGGC TTC

AT2G45590.1

Model type: Protein coding
Short Description: Protein kinase superfamily protein
Computational Description: Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G25390.1); Has 91863 Blast hits to 73683 proteins in 3539 species: Archae - 59; Bacteria - 6920; Metazoa - 25471; Fungi - 5140; Plants - 45446; Viruses - 121; Other Eukaryotes - 8706 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G44920.1

Model type: Protein coding
Short Description: cation/H+ exchanger 11
Curator Summary: member of Putative Na+/H+ antiporter family
Computational Description: cation/H+ exchanger 11 (CHX11); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 10 (TAIR:AT3G44930.1); Has 2197 Blast hits to 2179 proteins in 766 species: Archae - 96; Bacteria - 1401; Metazoa - 0; Fungi - 111; Plants - 516; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G44930.1

Model type: Protein coding
Short Description: cation/H+ exchanger 10
Curator Summary: member of Putative Na+/H+ antiporter family
Computational Description: cation/H+ exchanger 10 (CHX10); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 11 (TAIR:AT3G44920.1); Has 3267 Blast hits to 3245 proteins in 1126 species: Archae - 161; Bacteria - 2335; Metazoa - 0; Fungi - 113; Plants - 528; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00026.1

Model type: Protein coding
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim21 (InterPro:IPR013261); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G35440.1

Model type: Protein coding
Short Description: chloride channel E
Curator Summary: Enclodes a choride channel protein that is localized to the thlakoid membrane.
Computational Description: chloride channel E (CLC-E); FUNCTIONS IN: ion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: chloroplast thylakoid membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: chloride channel F (TAIR:AT1G55620.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G35440.2

Model type: Protein coding
Short Description: chloride channel E
Curator Summary: Enclodes a choride channel protein that is localized to the thlakoid membrane.
Computational Description: chloride channel E (CLC-E); FUNCTIONS IN: ion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: chloroplast thylakoid membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: chloride channel F (TAIR:AT1G55620.2).
Link: InterPro Scan - TAIR

AT4G35450.1

Model type: Protein coding
Short Description: ankyrin repeat-containing protein 2
Curator Summary: Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.
Computational Description: ankyrin repeat-containing protein 2 (AKR2); INVOLVED IN: in 6 processes; LOCATED IN: integral to chloroplast outer membrane, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G35450.2

Model type: Protein coding
Short Description: ankyrin repeat-containing protein 2
Curator Summary: Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.
Computational Description: ankyrin repeat-containing protein 2 (AKR2); INVOLVED IN: in 6 processes; LOCATED IN: integral to chloroplast outer membrane, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1); Has 85365 Blast hits to 29004 proteins in 1328 species: Archae - 144; Bacteria - 6951; Metazoa - 44906; Fungi - 6142; Plants - 3755; Viruses - 871; Other Eukaryotes - 22596 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G35450.3

Model type: Protein coding
Short Description: ankyrin repeat-containing protein 2
Curator Summary: Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.
Computational Description: ankyrin repeat-containing protein 2 (AKR2); INVOLVED IN: in 6 processes; LOCATED IN: integral to chloroplast outer membrane, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1); Has 85365 Blast hits to 29004 proteins in 1328 species: Archae - 144; Bacteria - 6951; Metazoa - 44906; Fungi - 6142; Plants - 3755; Viruses - 871; Other Eukaryotes - 22596 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G35450.4

Model type: Protein coding
Short Description: ankyrin repeat-containing protein 2
Curator Summary: Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.
Computational Description: ankyrin repeat-containing protein 2 (AKR2); INVOLVED IN: in 6 processes; LOCATED IN: integral to chloroplast outer membrane, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1); Has 85180 Blast hits to 28957 proteins in 1321 species: Archae - 144; Bacteria - 6924; Metazoa - 44765; Fungi - 6138; Plants - 3756; Viruses - 866; Other Eukaryotes - 22587 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G35450.5

Model type: Protein coding
Short Description: ankyrin repeat-containing protein 2
Curator Summary: Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.
Computational Description: ankyrin repeat-containing protein 2 (AKR2); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1).
Link: InterPro Scan - TAIR