1. Home
  2. Mutant Lines
  3. ET13329

ET13329

CSHL Arabidopsis genetrap mutant lines

Original: ET13329

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13329

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28545160 [Map]; Strand: c
      • AT1G76065.1 - [+] show detail - LYR family of Fe/S cluster biogenesis protein
        Distance: 0; Region: intron1 (CDS)
      • AT1G76062.1 - [+] show detail - MIR835a; miRNA
        Distance: -307; Region: promoter
    Flanking Genome Sequence: ET13329 - 5-prime edge 
    GCTCACAGAG CTCCTGTTCA TGTTAGAGGT TCGTGTCTTT CATCTCACTC 
    GACCAACTAT CTATGAGATT CGTCACATAG ACAAGAAATT TGCGTTCACC 
    GTAGATCCAT CTAGGGGTTT AGTAGATTTC GGAGGATAAA CTTTGTTTGA 
    TTCATGTGTT GATGTTTTGT AGGGGAACTG AAACAGACTG TTAGGCAAGA 
    GATGGAAAAG AACAGAGACT GCAATGACAA ACAAAAGATT CGGTATCTGA 
    TTAGTGAAGG TTTAGAGAGA ATTAAAGGAC TTGATGAAAT GTTGGATATG 
    CAGGGCCATT AGTATTGGTG TAAGATGATG TTCTTTTACA TTTTTTTTTG 
    GACCTCCTCC GGCTTAAATG GAAGGGGATG CAAGGCTCAA TTCTTCAAAA 
    AAAAATTCGG GCCATCTTTG GGTTAGGGCT TTTCCTGGCA AAGGTCCTTA 
    ACCCCAATGG ATGGAAATTT TTCAAGGAGC ACCATACTTT TCTCTTCTCC 
    CGGGATTTGT TTGAGGGTTT AAAA

AT1G76062.1

Model type
miRNA
Short Description
MIR835a; miRNA
Curator Summary
Encodes a microRNA of unknown function. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage. Mature sequence: UUCUUGCAUAUGUUCUUUAUC
Link
InterPro Scan - TAIR

AT1G76065.1

Model type
Protein coding
Short Description
LYR family of Fe/S cluster biogenesis protein
Computational Description
LYR family of Fe/S cluster biogenesis protein; CONTAINS InterPro DOMAIN/s: Complex 1 LYR protein (InterPro:IPR008011); Has 71 Blast hits to 71 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 35; Fungi - 10; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR