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ET13332

CSHL Arabidopsis genetrap mutant lines

Original: ET13332

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13332

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 835550 [Map]; Strand: c
      • AT4G01925.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -1210; Region: intergenic
      • AT4G01930.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 3252; Region: intergenic
    Flanking Genome Sequence: ET13332 - 5-prime edge
    TCCTACTTTC TCCCTTTAGA GCGGCGTGAA GAACGAACAA ATAAAAACTA 
    AAATTATATG TTTTTGTCCT TCCTACACCC AAATCCGCTA TATCTTTAGA
    TCGTCTATGT TAAAGGGGTT TTATTAAATG AAACAAATAC TGCTTAGATC
    AATCAAAGCT GTATCTATTT CATTTTGTTT TGTCGTCTTA TTACATCATC
    ACTAGAAATA TTTAATATAA TCCTATTATG ATAATAGTCA CTCCCGGAAC
    TCAAAACCAC TACGAACGGC TCTACATGCG GCATTTTATA CGTCCGATAA
    ATTGTGCACC ATTAATCTAC ATTTTCTGGG AATCAAACCC TAGTAGAAAA
    GTATTAATGA ACTCTCAGTT AACCATTGAA CCAAGTTTTA ATGAGAATTT
    TTAGTTAAAA GCAAAATTAA GAAACTATGA TTTAATAGAT AAAAAATAAT
    AATTCAACCA ATGGAAACAA GAAGGACATA ATTTGAATAG TTATAATTAT
    TAAACAAATA TAAATTGAAA TTGAAAAAAA TCAAATAATT TAAAACGAAC
    AAAAACTTTT AAAACTTTTT ATAGTAAAAG AAAACAAAGG AAGTATATCT
    TATGGAGGTT TTCTATCAAT ATTAATTCCA AAATTTAACG AACATCAAAA
    GTGAAATTGA AAAACTAATG AGGGAGATCA AGCTCATAAA TGGATCAAGT
    TGTTGAAAAA CGATTGGGGT ACACCTAA

AT4G01925.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01930.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, embryo, root, flower, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01910.1); Has 2022 Blast hits to 728 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 74; Fungi - 2; Plants - 1926; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
Link
InterPro Scan - TAIR