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ET13339

CSHL Arabidopsis genetrap mutant lines

Original: ET13339

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13339

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 12633119 [Map]; Strand: w
      • AT2G29490.1 - [+] show detail - glutathione S-transferase TAU 1
        Distance: -646; Region: promoter
      • AT2G29500.1 - [+] show detail - HSP20-like chaperones superfamily protein
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: ET13339 - 3-prime edge 
    GTAGAGGTTT TTACCGACCG TTACCGACCG TTTTCATCCC TTAATGAAGT 
    ATGGAATAAA TAATAATTAT TAACCTTTGT CTAAATTCAA AAGAAGTTTA 
    ACCGACGAGA TGATTTCGCT TAGAGTTCGA TTTCGGTTTA ACTAAACCAA 
    ATCAACCGAT ACCGTGAATC AAGACGGAAT CAAACCCAAA AACTGAAAAG 
    GTTCACATTA TATAAATGTT ATATTTTGAT TTAGATTATT ACATCATTTC 
    TTTCAAAATG ATTAACATTT TGTTTGATAA CTGAATATTT CTTCTGTTTT 
    ACAATG

AT2G29490.1

Model type
Protein coding
Short Description
glutathione S-transferase TAU 1
Curator Summary
Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
Computational Description
glutathione S-transferase TAU 1 (GSTU1); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 2 (TAIR:AT2G29480.1); Has 9031 Blast hits to 9013 proteins in 1259 species: Archae - 0; Bacteria - 4823; Metazoa - 1003; Fungi - 192; Plants - 2095; Viruses - 0; Other Eukaryotes - 918 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G29500.1

Model type
Protein coding
Short Description
HSP20-like chaperones superfamily protein
Computational Description
HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 6873 Blast hits to 6873 proteins in 1575 species: Archae - 184; Bacteria - 4083; Metazoa - 80; Fungi - 309; Plants - 1622; Viruses - 0; Other Eukaryotes - 595 (source: NCBI BLink).
Link
InterPro Scan - TAIR