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ET13343

CSHL Arabidopsis genetrap mutant lines

Original: ET13343

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13343

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5261736 [Map]; Strand: c
      • AT3G15536.1 - [+] show detail
        Distance: 414; Region: intergenic
      • AT3G15540.1 - [+] show detail - indole-3-acetic acid inducible 19
        Distance: -2288; Region: intergenic
    Flanking Genome Sequence: ET13343 - 5-prime edge 
    TCCTACTTTC TCCCTGGGAG AACAGGTGAA TATCTGGTTA AGCATGAAGG 
    GAAATTAAAA ACCAATCTTT ACCGGAATAG TTTCAGGCAA CAGTAATAAG 
    TGATGACAGA AAAAGAAGGC TCTCCTATGT AGAAATACTG AAATGGTTAC 
    TGTTAATAAA AAAATATTGA TTCATAAGGA CTTTTAGTTA AGTCAAAATT 
    TAGAACTCTC AATAACTAGT GAGCCCTAAG CCGTATGCTA TTTCATAGGT 
    TCTGTAACGT TTTAGTTTAT AGTTTATGTA ACGTTTAGAT TGCGAATAAC 
    TTTTCCGTTT TTAAATTGTG TTAGTCATTT TCATTAATAA ATATTAGTAA 
    TAACTTTTGA T

AT3G15536.1

Model type
Other RNA
Curator Summary
Unknown gene
Link
InterPro Scan - TAIR

AT3G15540.1

Model type
Protein coding
Short Description
indole-3-acetic acid inducible 19
Curator Summary
Primary auxin-responsive gene. Involved in the regulation stamen filaments development.
Computational Description
indole-3-acetic acid inducible 19 (IAA19); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: phototropism, gravitropism, response to auxin stimulus, response to brassinosteroid stimulus, stamen filament development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 6 (TAIR:AT1G52830.1); Has 1781 Blast hits to 1780 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1780; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR