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Mutant Lines
ET13346

ET13346

CSHL Arabidopsis genetrap mutant lines

Original: ET13346

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13346

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 1; Position: 3786984 [Map]; Strand: c
- AT1G11270.2 - [+] show detail - F-box and associated interaction domains-containing protein
  Distance: 0; Region: exon1 (5UTR)
- AT1G11270.3 - [+] show detail - F-box and associated interaction domains-containing protein
  Distance: 0; Region: exon1 (5UTR)
- AT1G11270.1 - [+] show detail - F-box and associated interaction domains-containing protein
  Distance: 0; Region: exon1 (5UTR)

AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTACC 
TCTCTTTCTT TTGGGCTTTC AACCCACAAT CCTTTTTCTT TGTCACATAA 
AAAAAAGAAG TCCGTAAACG CCGGTCCCAA AAAGAAAATA AAATACCCCT 
TGATTCTTGA CATGATTCAA AAAAAAAAAA GGGTTGGGAA ATTTTTTTTG 
GCCCAAAACC AAATTTCCCC CAAAAAGGGG GGTTTCAAAA AAGGGTTGGT 
TCCAAAAATT GTTCCGGATT GGATCCAAAA TTTTTTTCGG GAGGGGGAAA 
TTGCCGGTTT TGGGGCCCTT TTTTTTTTTT TGGGGGGGGG GGGACCCCCC 
CCCCCCTAAA AAAACCCTTT TTTTTTTTAA AAAAAAAAAA TAAAAAGGGG 
TTTTTTAAAA CCTTTTTTTT TAAAACCCCC CCCTCCGGGG GGGGCATTTT 
TAAAAAGGGG GGCCCCCCCC TGGGGGGGGG TTTTTTTTCC CGGCGGGGGT 
AAAAAAAAAA AAAAAAAATT TTTTCCCCCC ATTTTTCCTT TGGGGGGAAA 
AGTGTCCCCA AATTTTGGAG GGGAAAAAAA CCCCCTTTTT TTTTTTTTTT 
TTAAAAAAAA AAAGGGGGTT TTTTGCCCCA AAAAAATTTT TGCCCTTTTT 
TAATGGGGCA CCCCGGGGGG TTTTGGGGGG GGCCAAAAAA CGGGGGGGGG 
GGGG

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 672676 [Map]; Strand: w
  - AT2G02500.1 - [+] show detail - Nucleotide-diphospho-sugar transferases superfamily protein
    Distance: 0; Region: intron2 (CDS)
  - AT2G02510.1 - [+] show detail - NADH dehydrogenase (ubiquinone)s
    Distance: -629; Region: promoter
Flanking Genome Sequence: ET13346 - 5-prime edge
```
TTTTCATCCC TACCTCCAGC TAAAAGAATC ACAGATACGC TCTTCTCCTT 
CACAACAACA TTGCTCTGAA AAACATAAGA GATAAAAAAA AACCTTCAAA 
ATTTGAGTTG ATTCAAAACT TTAAACTTAC ATTCACACCA TTGCTCTGAA 
AAACAAAAAA ACCTTAAACT AG
```

AT1G11270.1

Model type: Protein coding
Short Description: F-box and associated interaction domains-containing protein
Computational Description: F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 1191 Blast hits to 1176 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1189; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G11270.2

Model type: Protein coding
Short Description: F-box and associated interaction domains-containing protein
Computational Description: F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G11270.3

Model type: Protein coding
Short Description: F-box and associated interaction domains-containing protein
Computational Description: F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02500.1

Model type: Protein coding
Short Description: Nucleotide-diphospho-sugar transferases superfamily protein
Curator Summary: Encodes a protein with 4-Diphosphocytidyl-2C-methyl-D-erythritol synthase activity. The enzyme has an absolute requirement for divalent cations (Mg2+ reaches the highest catalytic activity).
Computational Description: ISPD; FUNCTIONS IN: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity; INVOLVED IN: response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast, chloroplast stroma, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase (InterPro:IPR001228), 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site (InterPro:IPR018294); Has 6821 Blast hits to 6815 proteins in 2244 species: Archae - 30; Bacteria - 4964; Metazoa - 52; Fungi - 6; Plants - 61; Viruses - 0; Other Eukaryotes - 1708 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02510.1

Model type: Protein coding
Short Description: NADH dehydrogenase (ubiquinone)s
Computational Description: NADH dehydrogenase (ubiquinone)s; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, B12 subunit (InterPro:IPR012576); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase (ubiquinone)s (TAIR:AT1G14450.1); Has 55 Blast hits to 55 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 50; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR