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ET13347

CSHL Arabidopsis genetrap mutant lines

Original: ET13347

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13347

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 487666 [Map]; Strand: w
      • AT2G02040.1 - [+] show detail - peptide transporter 2
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: ET13347 - 3-prime edge
    AATGAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TAGTCAAGAT TTTGGAATTG AGGAAAATCA AAATTCGCTA ACCTAAGTGA
    TTAATTGAAA TTGAACAAAC CTGTAAAATT AAACCTTCTT CGATGAGAGG
    TCTTGCTTCT TCTTCGATGG AACCCATCGT TTTCGTTTTT TGAGCTGAAC
    CAATTTAGAT TCCTTACGTT GAAGCTACCT ATCTAACGAT ACTCTATTAT
    TTATCGGAGA CGTGACGGCT TTTTATTTTA CTTTTCCCGG CGACTTATTG
    GAAAATAAAA ATCAAAACTT TGATTATAAT AAGAGAAGTA ATTAACAAAA
    CTCATCTTTT TACGAATTTT TTGTTATTAT TATGACGTAA AGATAGAATT
    GTGGATCAAC CTGTTACCTG TCCATGTCTC A
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 487729 [Map]; Strand: w
      • AT2G02040.1 - [+] show detail - peptide transporter 2
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: ET13347 - 5-prime edge
    GATCTTGACT TTGGATTGAT CTTATGCATT TTCTTTCTGG GTTTATTGAG 
    ATCTTTTCTG GGCAATCACT GTTTTATCTA ATTGATGATT CCAATGTTTG
    AATTTTGCAA GTAGATATAG ATCAAACTTT CGAGCTTTGA TACAGTTATA
    ATTTAGTTAG CTAATCAAAA ATGTTTTGTG AATTTGTTTT AAGTAGGAAG
    TGAAATTGTA TGCTGAAGAT GGTTCAGTGG ACTTTAATGG AAACCCACCA
    TTGAAGGAGA AAACAGGAAA CTGGAAAGCT TGTCCTTTTA TTCTTGGTAA
    TGAATGTTGT GAGAGGCTAG CTTACTATGG TATTGCTGGG AATTTAATCA
    CTTACCTCAC CACTAAGCCT CACCAAGGAA ATGTTTCTGC TGCTACAAAC
    GTTACCACAT GGCAAGGGAC TTGTTATCTC ACTCCTCTCA TTGGAGCTGT
    TCTGGCTGAT GCTTACTGGG GACGTTACTG GACCATCGCT TGTTTCTCCG
    GGATTTA

AT2G02040.1

Model type
Protein coding
Short Description
peptide transporter 2
Curator Summary
Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays.
Computational Description
peptide transporter 2 (PTR2); FUNCTIONS IN: dipeptide transporter activity, high affinity oligopeptide transporter activity, tripeptide transporter activity, peptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, tripeptide transport, peptide transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G62200.1); Has 8080 Blast hits to 7668 proteins in 1494 species: Archae - 0; Bacteria - 3960; Metazoa - 799; Fungi - 488; Plants - 2224; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink).
Link
InterPro Scan - TAIR