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Mutant Lines
ET13373

ET13373

CSHL Arabidopsis genetrap mutant lines

Original: ET13373

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13373

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 4; Position: 227076 [Map]; Strand: c
- AT4G00500.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
  Distance: 0; Region: exon2 (5UTR)
- AT4G00500.2 - [+] show detail - alpha/beta-Hydrolases superfamily protein
  Distance: 0; Region: exon1 (5UTR)
- AT4G00520.2 - [+] show detail - Acyl-CoA thioesterase family protein
  Distance: -618; Region: promoter
- AT4G00520.3 - [+] show detail - Acyl-CoA thioesterase family protein
  Distance: -618; Region: promoter

TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACACGAG ATTAGTCAGT 
GTGGATCAAG AGGCTCTAAG AATAAAGACA GAATAATCAT AAGCTGGTCG 
GATCAAGCTT GTGTTCCAAG ATTTGTGTCC GAAACCACCA CCAACTACTC 
TAAAATAAAA AAAGAAGAAT TTTTAACAAT CAAGTGATTT CTTTTGGCGC 
TGAAGAAGAC ACGAATTACA GAGAGAGAAG ACAAGTTGAA TTTGTTATCT 
ACGAAATGTT CAAGTCAACC ATAGTTCGTA AAGACGAAAC AATGAAAGAA 
ACTTGTGGGC AAGAAGAATC TACTCACCAG TCACCATAGA TGCTCGAAAG 
ATTCCATTAG CATCCTCGAG ACTAGCGGAG AAAGACGTGC AATGTAGAAA 
TTTCGTCTTC GGAAGCTGTC GGGTCGGGTC GGGTCGGGTC GGATCTGTGC 
TGAGTGTAGA AGAAACTTTT GTTTTCTATA GGACAGCGTA TTAGGATTTA 
GGACCAACAA ATTTGGGCTT TTAGCTATAG GCCCATTAAA TTTGTCAGCA 
CTGCATCTGA GCGGTGTCCA CAGACTCTAT CGTATACCCA AGGGTACTGG 
ATAATTACCT CGTTGCATTT TTTATTTGTT TGGTCAGCAG ATTTTTAGTT 
GAATGATTGA ATTTGCCGGC CAACGTTTCG ACAGTCTCTA C

5 prime edge [+] show sequence

Chromosome: 1; Position: 20682795 [Map]; Strand: w
- AT1G55390.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
  Distance: 0; Region: exon1 (CDS)

CTTTATCCCT GGTCGGTATT GCGGGGTATC TTAGAAATAT CAAAACCAGG 
TGGTAAGGAG ATGAGGGTGA GAAGGTGAGA GGGGTGAAAA GGGTGTCTTA 
TCACCGGCGG AAGGAGGTGA CAGCCTCTGT GGAATTCTAA CTTGCAAGTA 
GCACAATAGT AATAGTACTT TCTACCCTCT AAATGCTTGC CTTTGCACGA 
AAAGCAGATA GAAAGTGGAC CGTGAGATCG CCGTCTCCGG CGGCAAAGCT 
TGTGTGGCTG AGCCGGATCG GACAAACGAC ATTGGGGTTC AGATACAGAA 
AAATAAGGAG GTGGTTTCAT ATTTGTTTGT TTGGAATGAA GGAAGAAGCA 
AATGAGAGAG AATGTATAAA TTTTTATGCT CCTTCTAGCC CAAGTCAAAC 
TACTCGAGTC TCTCTTTTTT CTCTCTCTTT TAATCCAGCT GTAGTTAGGA 
CAAAACTATT CCAGGCTTGC GCTAGCCAAT AGCCATAAAC TAAAACAAGA 
TTATATAAAA AGAAATTTTC ATATAAGTGG ATGAAAAAA

AT1G55390.1

Model type: Protein coding
Short Description: Cysteine/Histidine-rich C1 domain family protein
Computational Description: Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT1G55420.1); Has 11745 Blast hits to 4394 proteins in 388 species: Archae - 57; Bacteria - 4511; Metazoa - 1535; Fungi - 633; Plants - 1887; Viruses - 132; Other Eukaryotes - 2990 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00500.1

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity, calmodulin binding; INVOLVED IN: lipid catabolic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro:IPR005592); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G49050.1); Has 561 Blast hits to 561 proteins in 134 species: Archae - 0; Bacteria - 2; Metazoa - 171; Fungi - 76; Plants - 213; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00500.2

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity, calmodulin binding; INVOLVED IN: lipid catabolic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro:IPR005592); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G49050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00520.2

Model type: Protein coding
Short Description: Acyl-CoA thioesterase family protein
Computational Description: Acyl-CoA thioesterase family protein; FUNCTIONS IN: acyl-CoA thioesterase activity; INVOLVED IN: acyl-CoA metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), Acyl-CoA thioesterase (InterPro:IPR003703), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Acyl-CoA thioesterase family protein (TAIR:AT1G01710.1); Has 3429 Blast hits to 3402 proteins in 976 species: Archae - 0; Bacteria - 1910; Metazoa - 393; Fungi - 300; Plants - 65; Viruses - 0; Other Eukaryotes - 761 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00520.3

Model type: Protein coding
Short Description: Acyl-CoA thioesterase family protein
Computational Description: Acyl-CoA thioesterase family protein; FUNCTIONS IN: acyl-CoA thioesterase activity; INVOLVED IN: acyl-CoA metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), Acyl-CoA thioesterase (InterPro:IPR003703), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Acyl-CoA thioesterase family protein (TAIR:AT1G01710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR