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Mutant Lines
ET13375

ET13375

CSHL Arabidopsis genetrap mutant lines

Original: ET13375

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13375

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 5; Position: 15813713 [Map]; Strand: c
- AT5G39493.1 - [+] show detail - Plant self-incompatibility protein S1 family
  Distance: -3046; Region: intergenic
- AT5G39500.1 - [+] show detail - GNOM-like 1
  Distance: -1561; Region: intergenic

GAAACGGTAG AGGTATTTTA CCGACCGTTA CCGACCGTTT TCATCCCTAG 
AACCGAGTCA AGTCTTAGTG TTTTGCAAAG GGTTTCATTT CTTAAACCCA 
ATAAATAAAC ACTTCTTTCG TCAAGAACAA GCTAACCAAA CTATAAATTA 
GAAAGTACAA AAACCTTCTA GCAACAATTC AAAATTCAAA GACCTCAATT 
CAAAATTCGA AGAGAAGAGC ACAAAGTAAA CCAAATTCTT AGAACCACTT 
CAATTTTAGC TAAGCTAACG GAAACCCAGA AACATAAGGA TCGAAATAGA 
AGAGAAGAGT CCAGAGAAGA TAACAGAAAC CCAGAAACAT AAGGATCGAA 
ATAGAAGAGA AAGTCCAGAG AAGAGAAGAG TCCAGAGAAG AAAACAAACC 
TGAAGACGTC GATAAACAGT AAAGCTTGAT GAACAGAGGA GCTTGACGAA 
CAGAGGAAAC TAGATGAACA GAGGAAGGTG TTGAACAGAG GAAAGTCGTC 
GGGCAAATCG CCGAGAGATC GAAGAAGGAG AACAAAG

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 22554760 [Map]; Strand: w
  - AT1G61180.2 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
    Distance: 111; Region: intergenic
  - AT1G61190.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
    Distance: -2842; Region: intergenic
Flanking Genome Sequence: ET13375 - 5-prime edge
```
CCTACTTTAT CCATTGAAGA GAACTAGAGT CTTGTGTTTG GACAAGAGAT 
GTTGTTAAGT TTTCAATATC GATACCACCG ATTCCTTAAC CAAACCGGTA 
CACACTAACA CACCATACAA GAGAGAGACT AGCACATCAC TAGCTCAGCT 
CTCAATCCAC CATACGAGAG AGACTAGCAC ATCACTAGCT CTGCTCTTAA 
GTCTCTCATA CCATTCAACA ACAAACAACA TAAACCTCTC TAAACATTCA 
GAGCCATTAT TTATACTCGA ACTGAGTTTG TTCAAGATAT TTTTAGATCC 
TAAAAATATC TTCTTCTTCA AGCA
```

AT1G61180.2

Model type: Protein coding
Short Description: LRR and NB-ARC domains-containing disease resistance protein
Computational Description: LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G61190.1

Model type: Protein coding
Short Description: LRR and NB-ARC domains-containing disease resistance protein
Computational Description: LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 22150 Blast hits to 19364 proteins in 791 species: Archae - 16; Bacteria - 2974; Metazoa - 3433; Fungi - 288; Plants - 14918; Viruses - 2; Other Eukaryotes - 519 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G39493.1

Model type: Protein coding
Short Description: Plant self-incompatibility protein S1 family
Computational Description: Plant self-incompatibility protein S1 family; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility S1 (InterPro:IPR010264); BEST Arabidopsis thaliana protein match is: Plant self-incompatibility protein S1 family (TAIR:AT1G09245.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G39500.1

Model type: Protein coding
Short Description: GNOM-like 1
Curator Summary: Encodes GNOM-LIKE1/ERMO1, a member of ARF-GEF family. Required for endoplasmic reticulum (ER) morphology.
Computational Description: GNOM-like 1 (GNL1); FUNCTIONS IN: ARF guanyl-nucleotide exchange factor activity; INVOLVED IN: ER body organization; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: sec7 domain-containing protein (TAIR:AT1G13980.2); Has 2885 Blast hits to 2457 proteins in 243 species: Archae - 0; Bacteria - 32; Metazoa - 1491; Fungi - 682; Plants - 262; Viruses - 0; Other Eukaryotes - 418 (source: NCBI BLink).
Link: InterPro Scan - TAIR