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ET13379

CSHL Arabidopsis genetrap mutant lines

Original: ET13379

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13379

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 123021 [Map]; Strand: w
      • AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: -255; Region: promoter
      • AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: -255; Region: promoter
    Flanking Genome Sequence: ET13379 - 5-prime edge
    CTACTTTATC CCTGGTTTCT TAGGATAGAG AGCCCCAAAA AAACCTAAAC 
    CTAAACCCAG AGAGAGTGTG CCAGAGTGGG CCTATTTTCT CCTCACGGAC
    TAACGGCGAC GACTCCGAGG CTACATACTA GTAAATCAAA CAACTTGGGT
    TTTAGTGCAA TATAAAATTA TTTTGGGCAT AAATTGTAAT TACGGAAACT
    ATTGGGCATA AATTGTAATT ATGGAAACGT TTGGGCATGA ATTGTTATTA
    CGGAAACTGT TGGGGATAAA TTGAAATTAC GGAAACTTTG GGGGGCTTAA
    TTTGGCTTTT TGCCGGCACG GCAATGGGAG GAGACGAAAC CGAGAGAAAC
    AATGGGAGAC GCTGCGATCC GTACCGTCGT CGAAGCCATT CACTCATCTC
    CGACGCAAGC CGTCGTCTAT CTTTGCGGCG GTGCCTCTCT GGTTTCACTC
    TCTCTCTTTA TGATTGATTC GTATATACAC AAGTATGTGA TTGCTCTGTG
    CTTTTGAGTG ATCGAAATTG AATTCTCTTT CAAGCTTTAG GTTGGTTGAT
    GTCGGTTCCT GGAGCGTCGA ACACGCTTCT CGAGTCCGTG GTTCCTTATT
    CGAGAGTATC TAT

AT2G01220.1

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.2); Has 432 Blast hits to 425 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 78; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01220.2

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Link
InterPro Scan - TAIR