ET13388 - RIKEN Arabidopsis Genome Encyclopedia
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ET13388

CSHL Arabidopsis genetrap mutant lines

Original: ET13388

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13388

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 10356233 [Map]; Strand: w
      • AT4G18900.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: -232; Region: promoter
    Flanking Genome Sequence: ET13388 - 3-prime edge
    AAGATTACAA TAACCAAATA AACACACACA CACACACACA AAGAAAAGCA 
    TAACAAACAA AAAGGGTCAA ATAATAATTA TACCAATTTT CAAAATCCAA
    GGTCGAGAAT CGAGAGGTTC AACAACAAAG ATAACATAAT GATAGAAGAA
    TCGGGTAAAA CACATTCCTT ACTAAAGAAA ATAATTAACC TGATTAACTC
    TTTACGATGA TGACAACTTA CGTTACAAAT ACAAACGAGG CTTACACTTA
    ACCCTTGCTC GGAGGTATCT ATCCAAATTA GCGAGAGAGA GCGAGGGCTC
    TGTTTACATA CTCTTAAATA AATTCATTCA AAAATAAATC ATATAAAAAA
    ATTATGTATA TATGGGCCTC ATTTTTAGCC AAATAAGAAC AATTGGACAT
    CTAAATCGGA CCCACTATAT AATTTGTTGA CTTGTAAAAA AGCCCA

AT4G18900.1

Model type
Protein coding
Short Description
Transducin/WD40 repeat-like superfamily protein
Computational Description
Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G18905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR