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ET13394

CSHL Arabidopsis genetrap mutant lines

Original: ET13394

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13394

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 323442 [Map]; Strand: w
      • AT4G00753.1 - [+] show detail
        Distance: 409; Region: intergenic
      • AT4G00755.2 - [+] show detail - F-box family protein
        Distance: -1540; Region: intergenic
    Flanking Genome Sequence: ET13394 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTGATGTCAG 
    CTCTCTTCAA AGCTTCTTTA AAAAAAATTA TTATATAAAA ACAAACTGAA 
    ATTCCTTTTG ATAATTTGTC AAAATTTACA GTTATTGGTT TTCGTTTTAT 
    TTACGTATGC ATGAATAAAT TTATCAAACA CATGAACTAA ACCAAAATAG 
    AGGTGGTATG AGAAAAGAAC AGGACTAAAA GAACTTTGTT CCTCGAAAAA 
    AAGTTTGAAT TTCTTTATTA TGTAAGTATT TTTTTTCATC TTAGAAATCC 
    ATCAAAATAT CTTCCGCTTT TATTTTGAAC ATGACACACA CAAATGGAAG 
    AACCCAAAGA AGCCAAAACA TCATTAAATT AAACAAAACA AAAAACAAAA 
    ACAAAAGAAC CTACAAAGAG ACTTGGACAT CTTTTAATCC CAAACCAGAC 
    CTAATCTTAC AATCATTCAT GATTTAACTT GCAATATACA AAGCTCCAGC 
    TCCAACACTT CACCACGGAA TAAACCACTA GGAACAAACA TGACATTTTT 
    AGCTTTAGGG GTTTCAAAAC TCACTTCAAG AATTCT

AT4G00753.1

Model type
Pseudogene
Curator Summary
Pseudogene of AT5G37890; seven in absentia (SINA) protein, putative
Link
InterPro Scan - TAIR

AT4G00755.2

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); Has 80 Blast hits to 80 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 11; Plants - 57; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR