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ET13395

CSHL Arabidopsis genetrap mutant lines

Original: ET13395

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13395

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24166173 [Map]; Strand: w
      • AT1G65050.1 - [+] show detail - TRAF-like superfamily protein
        Distance: -494; Region: promoter
    Flanking Genome Sequence: ET13395 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAAATTTAG 
    ACTATAGTCA TCCAATCTCA GTTCAGAAAA AATAAAGTAA AGCAGATATA 
    ATAATCAAAA TCCTTTTTCG AGATATCGAA AATGTCCATC AAACCAACAA 
    TTTAAAAACA AACCAGGCCA GCTTTGTAGC TTTAGGCCCA TTCTAACACA 
    TTAATTTAAT TTATTTTATG TTTTGTGCAA CTCTTAAAAC TTCTCTGTAT 
    AAATCCTATC TAAACCCTAG ATCTAATATT AAGTGCCCAA GAAATCTCTT 
    AAGTCTCTCT CGTTGTCTCA GGTTGGTCGA TTCCTTCTCT AGATTTCCAC 
    TTGTTTAGTC TTTCAAGAGA ATAAAGCACA AAACTTTCTA TAACTCTCTG 
    TGTCATTTTC AATATCTGAG AATTCTATAA AAACGGACCC TTGTGTATCA 
    CATT

AT1G65050.1

Model type
Protein coding
Short Description
TRAF-like superfamily protein
Computational Description
TRAF-like superfamily protein; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT1G65150.2); Has 362 Blast hits to 327 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 16; Plants - 335; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR