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ET13402

CSHL Arabidopsis genetrap mutant lines

Original: ET13402

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13402

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17025629 [Map]; Strand: c
      • AT4G35950.1 - [+] show detail - RAC-like 6
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET13402 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAGAAGC 
    CAATTCCTCC GAAACTTCGA CCATTATCTT TCAATTAACC ATCTCAAAAC 
    CCTAGATATG TATAATGTGG AAACAAACCC CCCAAATAGA GAAAATCAGA 
    AATGTGAAGA AGGAAGGAAG ATGAATAAAC AAAAGGGAAC GTGAGGACGA 
    TGAATTGGAG GATGCGAGAG AGAGAGAGAA CAACAACTAG AGAGAGAAAG 
    AAAGAAGTAG AGAAGAAAGT GATGGCCGGA AATAATTGCC ATTGAAGCGT 
    TCGATTAATC TCAGCCATTC AACCTTCCGA CTGTTTTGCA ATCTTTTTAC 
    TTTTTTTACT TCTTCTGTTG TCTTTTAAAT AATTATTATT TTACTTCTTC 
    ATCTTGCTCG ACGAAAAANT TTCTAGGGCA AATCCTCACT CACGACTATA 
    TCGTGTATAC AAAAAAATAA AATAGAGGAG TTGCACATAT GTCTTTGTTG 
    TTTAAAATGC AAATAAGAAA AATTAACACT GGCTAAAATT ATAC

AT4G35950.1

Model type
Protein coding
Short Description
RAC-like 6
Curator Summary
A member of ROP GTPases gene family-like. GTP binding protein Arac6.
Computational Description
RAC-like 6 (RAC6); FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: Arabidopsis RAC-like 1 (TAIR:AT2G17800.2); Has 24191 Blast hits to 24163 proteins in 668 species: Archae - 9; Bacteria - 59; Metazoa - 12632; Fungi - 3489; Plants - 2692; Viruses - 20; Other Eukaryotes - 5290 (source: NCBI BLink).
Link
InterPro Scan - TAIR