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Mutant Lines
ET13406

ET13406

CSHL Arabidopsis genetrap mutant lines

Original: ET13406

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13406

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 16631262 [Map]; Strand: w
- AT4G34900.1 - [+] show detail - xanthine dehydrogenase 2
  Distance: 0; Region: exon1 (CDS)
- AT4G34910.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: -271; Region: promoter

TACTTTCTCC CTGCTCTGAG ATATTCGAGA AGCGTCATGT GAGCTAATCC 
ATCAGGCAAA ACTCTACGAA CACCATTAAC GTACATTATT GCCTCCATGA 
ACTCGTTCTG CTCCATCTTC ACTGAACCCA GACGAATAAC TGTTATCCAA 
TAATGGCAAA TATCCAATAA TGGCAAAAAT CCAATAATTG CAAAATCTTC 
TCTTTTTAAA ATGTTTTTTT TTTGGTTTCC ATTTTCCACC AAAAAAAGGG 
AAGCCCCATT TTTTAGCCCC AAAAAAAAAA AGGTACCCCA AAAAAACCCC 
AAATTGGGAG CCTTCAACCG GGCTGGGGAC TTTAAAAAAC CTCAGAACCG 
GCCAACCAAA GAAAACCCGG GGGGGGGGGT TTAACAACAA TTTCCCCTTC 
CTTTTTTAAT TTTTTCCCGG GCCCGTTTTT AAACCCTTTT CACCCAAAAA 
AGTTCGAAAA TTCCTTTTCC CTGGGGAAAA ACAAATTAAA ACCCTGGGAA 
GGATGGAACC CCGAAAGGGG GGGCCAAATT TAAAAAACCA

AT4G34900.1

Model type: Protein coding
Short Description: xanthine dehydrogenase 2
Computational Description: xanthine dehydrogenase 2 (XDH2); FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, allantoin biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: xanthine dehydrogenase 1 (TAIR:AT4G34890.1); Has 21587 Blast hits to 20745 proteins in 1345 species: Archae - 453; Bacteria - 12993; Metazoa - 1073; Fungi - 109; Plants - 266; Viruses - 0; Other Eukaryotes - 6693 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G34910.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 35246 Blast hits to 34671 proteins in 2939 species: Archae - 524; Bacteria - 16250; Metazoa - 5646; Fungi - 4238; Plants - 2336; Viruses - 4; Other Eukaryotes - 6248 (source: NCBI BLink).
Link: InterPro Scan - TAIR