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Mutant Lines
ET13408

ET13408

CSHL Arabidopsis genetrap mutant lines

Original: ET13408

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13408

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 1; Position: 20682738 [Map]; Strand: w
- AT1G55390.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
  Distance: 0; Region: exon1 (CDS)

AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAAT 
ACCGACGACG GCTCCGCGGC TTCAGAAAGA TCGATAAACG AAACTGACGA 
TGATGATGAC TCTGAAGACG GTGGCCATGA TGATGAAGAT AACAATTTTG 
TTGACGATGA TGTTATTGTT AATGATGGTG ATGGTGTTGG TGAAGATCGT 
GATGGTGACA GTGATGGGGA TGGTGATGGT

5 prime edge [+] show sequence

Chromosome: 2; Position: 19555061 [Map]; Strand: c
- AT2G47700.1 - [+] show detail - RING/U-box superfamily protein
  Distance: -477; Region: promoter
- AT2G47710.1 - [+] show detail - Adenine nucleotide alpha hydrolases-like superfamily protein
  Distance: 0; Region: exon4 (CDS)

CTTTATCCCT GATTCTGATT ACTTGTCGGT TTGTGTGGCA GGGCGGTTCT 
CGGGAGTACG AGTGACTACT GCGCTCATCA TGCTCATTGC TCGGTGATGA 
TCGTGAAGAA GCCTAAGATC AAGGTCTGAA ACCTAAGGGA AGGCTACTCG 
GTCAAAGCAA AGTCTCTGCA TAGTCTTCTA ATTCAGAAGA ATAAAGTGAA 
ATAATATTAG CTTGATGTGT AATTGTTTAC TACATACAAT GTTTTGGTAT 
CCTTAGACAA TCAATATTCG TGTGTTATAA TATGCTAATC TTTCTCATAA 
CAAAATGGAT GTGAAAGTTA TAATAAACTT CATCTCACAC AAACAAGAGA 
AGAAAACAAA TCAACTAAAT AGAGATTAAT GATTTAAATG AACAAATTTA 
TAGTTTGGTT GTTGGTTCAG ATGGATGGAT GGTTTGATGA TCATCTATCC 
AAAACTAAAG TAATAAAATA ATAATAAAAA ATTATCCACA ATGGGAGAGG 
AAAGAAAAGA AAAGGGAG

AT1G55390.1

Model type: Protein coding
Short Description: Cysteine/Histidine-rich C1 domain family protein
Computational Description: Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT1G55420.1); Has 11745 Blast hits to 4394 proteins in 388 species: Archae - 57; Bacteria - 4511; Metazoa - 1535; Fungi - 633; Plants - 1887; Viruses - 132; Other Eukaryotes - 2990 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47700.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RED AND FAR-RED INSENSITIVE 2 (RFI2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G05545.1); Has 457 Blast hits to 456 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 168; Fungi - 17; Plants - 198; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47710.1

Model type: Protein coding
Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49050.1); Has 2830 Blast hits to 2747 proteins in 619 species: Archae - 112; Bacteria - 1833; Metazoa - 129; Fungi - 32; Plants - 667; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).
Link: InterPro Scan - TAIR