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ET13419

CSHL Arabidopsis genetrap mutant lines

Original: ET13419

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13419

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5775895 [Map]; Strand: c
      • AT3G16910.1 - [+] show detail - acyl-activating enzyme 7
        Distance: -394; Region: promoter
    Flanking Genome Sequence: ET13419 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    GAACAGTATC ATGTTTTACA CGTCATTGAT AATTAAAGAA TTTCTTGCCA 
    ATTTTGGCAC TACACACCAA GAAAACATTT TTTCTATAAC CTTATCCCAA 
    TCACATTATT AAAATCACTT AAGATCACTA CTAGATTTGA CCTGACTAGA 
    TCTGACCGTT CGTGAGAAAG CTACTTAAAA TAAAATAAAG AAAGAATGAC 
    GTACGTAGAC CAAACTACTG TTATTTCTTG AATCCATTTA CATGGCGTTT 
    CTATACTTCT ATCTTATCGA CCTAACTTAA TTGCTTCGAA TGGTAGTCAC 
    ATTCCTTTGG CCGGCCAGTT GCTGGAGCCT GGAAGTAGCT ATTCACAGTA 
    TTAGCTTGTT TGTGTTTTTT TTTTTATCAA ACCGATAATC TCATTAACTC 
    AAATTCTTTC AAAAGAGGAG GGATTCCTTC CAAACTAGAA AAAATTCCAC 
    CCAACTTAAA AACAATTTTC CGAAGTAATT AAGACACCCA AACGATGACT 
    AACCTAGAGA TAAATAGCCG ATAACAATCT TAAACATAGC CCATAAAAAA 
    TTGCAAGACA ACAATCTCAA AATCTTTTAA ATCTTTGTCT TCTGGGGGGG 
    CATGCAAAAA ATATTTATAT TTTTTGAAAA AAAAATGGTG TGGAAAATAT 
    TGCAATCGTT CGAACGTATA TTTTTACAAA ATATTAAAAC CAAGCCCATG 
    CAAAACACAT ATACACCAAA GTCAACTTTC TTTTTCAAAA GT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26789774 [Map]; Strand: w
      • AT1G71015.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: ET13419 - 5-prime edge 
    CTTTATCCCT AGTAAGGACA TGGCGATGAT GATGAGGATA GATAGCGTGA 
    GCCACATCAC CAATACTGCT CTACTTCCAT GTCTCTACAA CGGAACAGTT 
    CTTCGCCGGC GATCCCTCAG TCTCCGAAAG TGTGGTTTCC GAGAACGAAA 
    GTTTCAGCTC CGATGCGTCT CTGCTTCTTC CGATTCGTTG CAGTTTCATC 
    TCTCTCGACC AAANGNNGCA CTGCTTCGGA TTCCAAGAGA ACGTGGCCTG 
    GAAAATCTTT AACCACTGTA CCAGCTTCCA CAGGCGTTTT CAGTTTGAAA 
    CTCTCGCCAT TGATGTTCAT GATTGTCGCT GTTTTCTTGG TTCCCAAGCT 
    ATTTCCCATT TTGGTGAATG ATGTTGTGTA AAATGTTAGT ATCTTTTAGG 
    TTCACAAATG AGATGAAAAA ACTTTGTAGG TTGGTGTCTA TTAAGAGCTC 
    AGTAGTTCAA GGTGGGTGTT GTGTTAGATC AGATCATTAT AGATTTTGGA 
    TTTGATTTAT GGTTGGTTGC TGATGATAGT

AT1G71015.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01340.1); Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G16910.1

Model type
Protein coding
Short Description
acyl-activating enzyme 7
Curator Summary
Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle.
Computational Description
acyl-activating enzyme 7 (AAE7); FUNCTIONS IN: acetate-CoA ligase activity, AMP binding; INVOLVED IN: glyoxylate cycle, acetate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73044 Blast hits to 67204 proteins in 3521 species: Archae - 1140; Bacteria - 48125; Metazoa - 3129; Fungi - 3108; Plants - 2327; Viruses - 1; Other Eukaryotes - 15214 (source: NCBI BLink).
Link
InterPro Scan - TAIR