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ET13426

CSHL Arabidopsis genetrap mutant lines

Original: ET13426

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13426

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 121627 [Map]; Strand: w
      • AT2G01210.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13426 - 3-prime edge
    AATGAAACGG TAGAGGATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    AACGATGATC CTACAGGTTC TCTTAACAAT TGGAACTCAT CAGACGAGAA
    CGCCTGTTCG TGGAACGGTG TAACTTGCAA AGAACTCAGG GTGGTGTCTC
    TAAGCATTCC AAGGAAGAAT CTTTACGGTT CTCTCCCTTC GTCTCTAGGG
    TTTCTCTCCA GTCTCCGTCA CTTGAATCTC CGGAGCAATA GGTTTTATGG
    GTCGTTGCCT ATTCAGCTTT TCCACCTTCA GGGACTCCAA AGTCTAGTCC
    TTTACGGCAA TTCCTTTGAT GGGTCATTGT CGGAAGAGAT CGGTAAGCTT
    AAGCTTCTTC AGACCTTAGA TTTGTCACAG AATCTCTTCA ACGGGTCGTT
    ACCACTTTCG ATTCTGCAAT GCAACAGACT TAAAACACTC GATGTCAGCA
    GAAACAACTT GTCTGGTCCT TTGCCTGATG GGTTTGGCTC AGCGCTTTCC
    TTCCTCTGAA CAAACTCGAC CCTCGCCTTC AACCAATTCA ACGGCTCCAT
    CCCCAGCGAC ATTGGAAACC TCTCCAACCT TCAAGGAACT GCTGATTTCT
    CTCATAATCA ATTCACCGGC TCAATCCCAC CTGCCCTTGG AGATCTTCCT
    GAAAAGGTTT ACATTGATCT CACTTTCAAC AATCTCTCCG GTCCCATTCC
    TCAAACCGGT GCTCTTATGA AC
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 121677 [Map]; Strand: w
      • AT2G01210.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13426 - 5-prime edge
    CCTACTTTCT CTCTCTCGAC CATGAACGCT TTGTTTAAAC GTTAAGAGCG 
    CAAAGCCTTC GTCGTTTAAG CCACTTATGA CAGTCACATT GCAGAGAAGA
    GCAACGAAGA TGATCAGCGA GGCCAACATT ATCAGATGCA AATTAGAACA
    AAAAGACGAG TGTTGGCTTT GTACAAAGCA AAGAGAGATA GTAGCAAGAA
    GAGTGTGATA TTGATGGAGT GAGAGTAAAG TGAAAAAGAT ACTCTCGTGG
    AAGAAAAAGG AGAAAGAAAG AATACAAAAA GTAGAGAGAA AGAGAGAGAG
    AGCTCTGTTT TTGCATTGGG AGAAGAGAAT TAACAAAAAA AAAGAAATGA
    CCAAAGAAAG AGGTGAAAGT TGGAGAAAAG AGAAGGCCAT GGCGAAGTAA
    TCCATACGCT AATTTGACCA CTAATCTAAT GGGTTTGAAT GGTAACAAAC
    TTAAGCTTTA TACAGTTTTG AATCAATCAT AAAAACTTTA TCAAAAATGT
    TACAAAAGGT TTTACTTTTA GCTTTTTTGA AGAGCTAGTT TCCC

AT2G01210.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G25320.1); Has 133812 Blast hits to 98087 proteins in 4104 species: Archae - 103; Bacteria - 11207; Metazoa - 34549; Fungi - 6957; Plants - 66297; Viruses - 188; Other Eukaryotes - 14511 (source: NCBI BLink).
Link
InterPro Scan - TAIR