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ET13429

CSHL Arabidopsis genetrap mutant lines

Original: ET13429

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13429

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22395083 [Map]; Strand: w
      • AT3G60580.1 - [+] show detail - C2H2-like zinc finger protein
        Distance: 39; Region: intergenic
      • AT3G60590.3 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -3145; Region: intergenic
    Flanking Genome Sequence: ET13429 - 3-prime edge 
    TAGAGGTATT TTACCGACCG TTACCGACCG TCTTCATCTC ATCTCGACGA 
    CAACACGACG TGAGGCCAAT ACGAAAAAAA GAATCGGCGT TAGAACATGT 
    AAAAGTAGCC TCCTTTGCAT TTAAAATAAA ACATTATCTT TCTTTTTTTT 
    GTCTAGCTCG ACCCCAAAAA TAATAATAGT AAAAGAAGAA AAAAAAAAGT 
    TTCAACTTTT ACAAAATTTG GGCCACCCCA ATTCCCCCAA AGCTGGTTCC 
    TTTAATTCAC CATCCATGGA ACCACCACAA AAACTCCGTC TTTTTCGGTG 
    GGGGCAGGAA AATAAAAATT TATCATCCCC GGTTCCACAA ACTCGTTTTA 
    ATGAACTCCA CGTTGTGGAT TCACAAAAAA ATCCCCAACC CCGGAAAATC 
    TTTTGGGACC TCCAAGGGCT GGCCCCAAGG CAAA

AT3G60580.1

Model type
Protein coding
Short Description
C2H2-like zinc finger protein
Computational Description
C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G45120.1); Has 2639 Blast hits to 2349 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 1624; Fungi - 13; Plants - 935; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G60590.3

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR