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ET13442

CSHL Arabidopsis genetrap mutant lines

Original: ET13442

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13442

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 114829 [Map]; Strand: c
      • AT4G00250.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: -863; Region: promoter
      • AT4G00260.1 - [+] show detail - Transcriptional factor B3 family protein
        Distance: -142; Region: promoter
    Flanking Genome Sequence: ET13442 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTATTC 
    TTGAGTATAT CAATGGTCTC TCATAGTTTC AACAACACCA ATAAACTGTC 
    ATCTTCAAGT TGGAGTTTAT TACACTCGTT CCTTCAAGAA ACTGTACCGT 
    CGACTTTCAG ATTTAGCCAT TTAGGACTTC TCAAGATTTT GAAAATGGCG 
    CATCAACATT TCTTCAAGCC TCTTCTTCCT GGCTTCCACG CCTCCTTGGT 
    ACTCTCTTTC TCGCTCTTTC CCTT

AT4G00250.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00238.1); Has 626 Blast hits to 580 proteins in 96 species: Archae - 0; Bacteria - 6; Metazoa - 135; Fungi - 97; Plants - 294; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00260.1

Model type
Protein coding
Short Description
Transcriptional factor B3 family protein
Computational Description
maternal effect embryo arrest 45 (MEE45); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 539 Blast hits to 263 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR