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ET13450

CSHL Arabidopsis genetrap mutant lines

Original: ET13450

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13450

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13137363 [Map]; Strand: c
      • AT4G25835.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13450 - 3-prime edge 
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGTT 
    AGCGGAAGTG GTTGATAGGG CTGAGATTAC ACCGGCTGAC GTAAGTGAGG 
    CTTTGATTAA GAATCGGAGG GATAAAGAGA GAGCTGTGAG GGAGCTTTTG 
    GTTGATTTGA GAAGTAGAGT GGAGAGAAAT GAGAAGAATG GGAAATCGAG 
    GGTTCAAAAT GTGAGCTTGG AAGAGCAAGA GAATAGAGCT TTCGAAAGTC 
    TTTACGCAGA AGAGAATGGA GGAGAAGAAG AAGAGATTGA GGATAACATT 
    TGCAAAAGTA GTGATGATTG TTCTTAATTA GGTTTTCTAA CGTTTCTATG 
    TTCTACACAA TGTGAAAGTT GTGTGACCTT TCTTATGTTT CTCCTTTTTT 
    GGGTAGTTAA CTTTTTGAAG TAAGCCAAAG TGAAGAAGAA GAAGGAGAGA 
    AAATAGAAAA GAGGTAGAGA GTTTGTTAAA ATAAGCAAGT GGTGGTGATT 
    AAGATTTTTG TATGTGGCGA TCGGGAAATG CAAAGAGATT CATTGGTTAC 
    CATTGGCATA TGATTTGGTG TTACTATAAA TTTATAATAG TTTCGTTACA 
    CTTTTGACAT AGAATTCCAT ATTATTTTTT AACAATAGCA TCCAATTCTT 
    TTTAAAAAGA AAAACTTGTG TGTTTTTAGA GGGTACGG

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13137309 [Map]; Strand: c
      • AT4G25835.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13450 - 5-prime edge 
    TCCTACTTTA TCTCTGTCGA CTACTCCTTA AAACGACGTC GTTAAGATCA 
    CCTTCCTCAA ACCCCAAGTA ATTCCTCAAT AAAATCTTGA CCGAAGAAAA 
    CGTACAGTAA CTCATGTGTA TATGCATATC CATTCTTCCA CTTCTAAGCA 
    ATGCAGGATC AAGCTTCTCA ATGTGATTCG TCGTGAACAC AAAAATCCTC 
    TCGCTACCAC AACAAGACCA AAGTCCATCA GTGAAATTCA ACAAACCTGA 
    AAGCGTTATA GTGTTCCCAT CACCCAAATC ATCACCTAAA CCGGACCCGG 
    TTAACATCTC CGGTTCGTTA TAGCTCCCTG TGCTCTGTTT CTTGTTACGA 
    TTCGTTAAAT TGATAGAACA ATCAATATCC TCGATAACAA TTATCGACTT 
    GGAGCTAGTC TTCATCAGAA GCTTCCTCAG TTCAGAATTG CTTTTGACCT 
    CCGTGAGCTC AAGATCGTAG ATGTCGTACC GGAGATAGTT AGCCATGGCG 
    GCGATCATGC TCGACTTCCC TGTTCCGGGA GGTCCATAGA GCAAGTAACC 
    TCTTTTCCAA GCCCGACCAG TTCTCTCGTA AAAAGATTGA CACTCAGCGA 
    AATCTTTAAG ATCCTCCATG ATCTGTTGCT TCTTAACCGG ATCCATAGCG 
    AGAGTATCGA AAGTACTCGG ATGCTTAAAG GGAACAGATT CCCAAGGAAG 
    ACCTCTAGAA TCAAGAGATT CACCTCGTGG ATTCGTGTAA AGAAGCCGAT 
    CTTGATTCAA CCGACGAATC TCGTTAGCTT TCTCCATGAT GTAATCCAAG 
    TAAGAATCAA

AT4G25835.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G57480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR