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Mutant Lines
ET13455

ET13455

CSHL Arabidopsis genetrap mutant lines

Original: ET13455

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13455

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 82659 [Map]; Strand: w
- AT4G00190.1 - [+] show detail - pectin methylesterase 38
  Distance: -619; Region: promoter
- AT4G00200.1 - [+] show detail - AT hook motif DNA-binding family protein
  Distance: 0; Region: exon6 (CDS)

GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTATTTACCC 
GTCGACTGAG TTTGAGTTTC CAGATGGAAG ATTAGGTTTC AGATTAACTC 
TCTACTATCT GTACAATGGT TAGGAGGATT GTTGAAGCTG AATGTTACTG 
TACGCTTTTC TTTATTTTAG AACACAACTT GAGCTTCTTC TACTTTTAGG 
GTAACTTTCT CTGATGACTT GCCTCTTGTT ACTTACTATA TTGCTAGTAC 
TGAGGTTTAA TCCTTTTAAT GGCGGAT

AT4G00190.1

Model type: Protein coding
Short Description: pectin methylesterase 38
Computational Description: pectin methylesterase 38 (PME38); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: flower, synergid; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G45220.1); Has 2963 Blast hits to 2921 proteins in 467 species: Archae - 10; Bacteria - 871; Metazoa - 1; Fungi - 198; Plants - 1837; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00200.1

Model type: Protein coding
Short Description: AT hook motif DNA-binding family protein
Computational Description: AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 772 Blast hits to 768 proteins in 34 species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi - 0; Plants - 749; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR