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Mutant Lines
ET13484

ET13484

CSHL Arabidopsis genetrap mutant lines

Original: ET13484

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13484

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 352054 [Map]; Strand: c
  - AT4G00830.3 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT4G00830.4 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT4G00830.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT4G00830.2 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: ET13484 - 3-prime edge
```
GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGTCTTC 
ATCTCATTCG ACCAGAGATC GAGAAATAGC CGACGAAGTT TTGTTTTTTG 
AGTAAAACAG TATTCGTCGG ACAACCGAAG CGAAATCCCT AATTTCCCAC 
AACACGAAAT ACCAATTTCC CCAATTCGAA AACAAACACG GTCTGGTATG 
CCGAGAAAAT TCTCCATTTC TACTTTTCTT ATACATTTGT TTTGGTTGTT 
TCATATAAAT ACTTCTCATC TTCTTCGATT TTGTTACCCT CCCCCAAACA 
ATATAAAAAA AAAGGGATAA CCCCTAGTTT CTTTCTCAGA CGGTTTCAGG 
TTCAAATTTT TATTTCGGAC CTTACCGGGG GAGAAATTGG CTTTCTGGAG 
AGAGGGGG
```

5 prime edge [+] show sequence

Chromosome: 4; Position: 351997 [Map]; Strand: c
- AT4G00830.3 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -19; Region: promoter
- AT4G00830.4 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -19; Region: promoter
- AT4G00830.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -26; Region: promoter
- AT4G00830.2 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -49; Region: promoter

CCTACTTTCT CCCTGATGAA GACACTCCTT ACCCACTCGT GGGCTATGAT 
CACATGTTAC GCACACATTA ACCCTAAATC AAAACGCTTT TTAAGCCCAC 
TGTTTTTATT GGGCCTAGTG TTTTCTAGTT CTTTATTATA CCTGTTTAAA 
AAATTCGTGA TTTTGCCAGC CCTGCCGTTT TCTTCGGTGA TATGAAAACT 
ACGTGCTGTT TAAGATTATT CCATTTCAGA AGCATTTAAT TTATATTTAG 
GTGGATATAG AGTAGTAGTG TATAACGTAG AAGACAAGAC TGATCATGTA 
GGAATCATGT CACATGGGTA ATGTTCCTTG CTCGTGGATC TCAAGTTGCA 
AAGTTGCAGC TTTTTTTTAT GGTTTTCTTA ACAACTTCAC TTTGCATGTA 
AAAACAAATA AGGCCAGTGA AAATTTTCGT TATTTTATAC TAAAAAGATT 
CCATATAATT AACAAAGATA CCATGACAGA TTGATAAACT ATTGTTCACA 
TCCTAATTGC AACATTTATA GATAAAAATA TGAGCATACA TATTTATATA 
GAGATTAGTT AGTAAACACT TCCAATTATA AGCTACAAAT TCACACACAC 
AAACATAAAC ACAAACAAAA TTACACACCA ATCTCAAAGA TCATCAATAA 
AAACTGAAAA AGTTATGGTT CTTTTTGTCA AATTGTTTTT ATTTATATAT 
AACAAAAAAA A

AT4G00830.1

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2); Has 49171 Blast hits to 28860 proteins in 1092 species: Archae - 87; Bacteria - 2901; Metazoa - 24152; Fungi - 5892; Plants - 6872; Viruses - 415; Other Eukaryotes - 8852 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00830.2

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00830.3

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition, domain 1 (InterPro:IPR003954); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2).
Link: InterPro Scan - TAIR

AT4G00830.4

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2).
Link: InterPro Scan - TAIR