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ET13485

CSHL Arabidopsis genetrap mutant lines

Original: ET13485

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13485

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24480325 [Map]; Strand: c
      • AT1G65810.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon2 (CDS)
      • AT1G65810.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13485 - 3-prime edge
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTGAC 
    AATTAAAGAT CCCTAGGAGG GTTAAAATCT TTCCCTGGGT TGATTTCCCA
    AAACTTAAAA GCTTGTGCAC GACGTATCGT TCCCATACTT GACAACAAAT
    CAGCATGGGT CTCTTCAATA ATCGGTTTAA CAAATGACTC AAAATACTCT
    TTGGTTGATG TGAATGTGTT AGGAATCTTC CCTACCTAAT AACCAAAAAC
    ACAAAATCCA TAAAGCAACT AAGAAAAAAA AAAAAAAATG GTTTTAAAGT
    AAAGACAAAA GTCAAAAAAA TACATACCCG GGCCCCGGAA TAAATTGGAG
    TTAACCCCTT CCCGAAAAGA CCAAGAAAAA ACACCTTCGC CTAAATCCCT
    CCCTTGGAGG ACCTTTCCCT CCTTCTGGGT TCCTTTGGCA ATCCAAAATG
    GCCCCACCGT AATAAACTCG GTTAAGGCAA ACCCCA
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24480267 [Map]; Strand: c
      • AT1G65810.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon2 (CDS)
      • AT1G65810.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13485 - 5-prime edge
    CCTACTTTCT CCCTTATGAG GTTACTTTGC AGATGACAAA TGAGTATATG 
    ACCAAAGGAG GTCAAAATCT GTTAGAGGTT AATGATCTTA TTGCAGTGAC
    CGATAAGAGG CCTATTCGAA TCGATGACTT GAGATTTTCT CATGAGCCTT
    ATTTGCTAGC TCTTGTTTGT GGAGTGAATG AAAATAATCC ACATTTGATA
    ACTATTTTGG CTTCTAAGCC AATTATTTTC GACGATGATG ACGATATAAA
    AACGTCGTCG AAGAGAGGAA AGGGTGAGAG GAAAAGCTTA AGTTTCTTTG
    GGGTTAATTT GATCAACATG ATGACAAATA TTCGTATTTG GACTGCGTTG
    CATCCAAACC CCGAAGGAGG AAACTTGAAG CTTATTTCAA GAGTACTTCA
    AAGCAACAAT GAGGTAATTA AGTTAAGTTT TGAAAACAGA ACCAAAATCA
    TGTTTTGAAA TATTTTTCTT GTGTAGGTTG ATGGGAGGAA GTTGTGTTTC
    TTGTAAAGAA AACAGTGAGA GTGTAGTCTC AGATTACTCA GCTCGAATGC
    TA

AT1G65810.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65780.1); Has 6257 Blast hits to 5371 proteins in 1056 species: Archae - 197; Bacteria - 1787; Metazoa - 1336; Fungi - 1200; Plants - 672; Viruses - 106; Other Eukaryotes - 959 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G65810.2

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell, seed; EXPRESSED DURING: E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65780.1).
Link
InterPro Scan - TAIR