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ET13492

CSHL Arabidopsis genetrap mutant lines

Original: ET13492

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13492

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27217276 [Map]; Strand: w
      • AT1G72290.1 - [+] show detail - Kunitz family trypsin and protease inhibitor protein
        Distance: 485; Region: intergenic
      • AT1G72300.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
        Distance: 201; Region: intergenic
    Flanking Genome Sequence: ET13492 - 3-prime edge 
    AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT AGAACTGGGG 
    TCTGTAAGCG GCATTTAATC GAACATTTGG TGTGCATAGT TACCAAAGAG 
    ACATTGAGTG AAAAGAAAGA GTCGTATGAC GCGCGAAAGA AGACAAAGCA 
    TGAGAATCTG AGAAACTGAG ACATACCTAA ACATCAATGG AGGATTCAGA 
    GACAGAGAGA GAGAGAGAAA AAAAGAGAGA GGTTTTTGTG AAACGAAAGC 
    TTTTGATTTA GACTTTTAAA ACTTATTGGA TAATATATGT CTTGCTAAAC 
    GTCGTCGTTT TGAGTGTTTT TGGGAAAATA AGCTATATAG AGTAACGCCA 
    AAAAAAGAAA CCCTATCGTG ATCAAAAGAA TAGTGTTACG TTTCTTTGTT 
    GATAAAACCT TGAGATACTC CTCAAATATC TTAATCTCTC AATTAAGCAA 
    GAGACATACA CGTTTATTTA TCCGGTTTGA TTAGTCGATG TNCACGAGAT 
    CCACGTCCGG AGCTAGATTC TGTCCAGCAA GTTATACTAT GAATGATCAA 
    TGTTTTCTCA AGCTCAAGAT CTTTACAAGA GGAGAGAAAA TTTTCGGATA 
    CAAAGTAGAA TGAAGAAGAA AACTATTTCA TGCCTTAAAC AGATTCAACA 
    GCAATGCCTA TGAATGATTC TCCACATCTA TGTATCTGGA TCTGGCCACA 
    TTTTTCTTTC TTATTAATTG AAATTTGAAA TAACTCATTA TTTTA

AT1G72290.1

Model type
Protein coding
Short Description
Kunitz family trypsin and protease inhibitor protein
Computational Description
Kunitz family trypsin and protease inhibitor protein; FUNCTIONS IN: endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I3, Kunitz legume (InterPro:IPR002160), Kunitz inhibitor ST1-like (InterPro:IPR011065); BEST Arabidopsis thaliana protein match is: Kunitz family trypsin and protease inhibitor protein (TAIR:AT1G73325.1); Has 331 Blast hits to 331 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 331; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G72300.1

Model type
Protein coding
Short Description
Leucine-rich receptor-like protein kinase family protein
Curator Summary
Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion.
Computational Description
Leucine-rich receptor-like protein kinase family protein; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: receptor like protein 2 (TAIR:AT1G17240.1); Has 184889 Blast hits to 127916 proteins in 4307 species: Archae - 126; Bacteria - 18793; Metazoa - 54455; Fungi - 9661; Plants - 78637; Viruses - 498; Other Eukaryotes - 22719 (source: NCBI BLink).
Link
InterPro Scan - TAIR