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ET13504

CSHL Arabidopsis genetrap mutant lines

Original: ET13504

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13504

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 105158 [Map]; Strand: c
      • AT4G00238.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET13504 - 3-prime edge 
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGATCAA 
    GAGTGAGTGA GAGAGTTACT TTTTTTAGGG TTAGTGAGCG GCGAGACTTT 
    TTTTCCTTTA ACGCTGAACA TTCTTCACTC TCTTTTATAT TTAACAAACA 
    ATCTAATTAA ACAAAGCCCA ACAACAAATT AAGGGTGTTC GAATGTTGTC 
    TGCTAAGAGT TTTGGTGGGC TTGATAGGGA CAAGGTATTG ACTTTAGACT 
    AAGTATCATC GGTTGGTCTT GTCTAGTGTT CT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 105088 [Map]; Strand: c
      • AT4G00238.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13504 - 5-prime edge 
    TCCTACTTTC ATCATACCGA AAAAATCCAA TGGCTTCTTT GGAAAATCCA 
    GCAATCGATT CTTCAAGCGA ATTTGAGAGT TCTTCTGAAG AGATCTCTTC 
    TTCTAAAGAA AGCAAACCCA AAGAAGCTCC CGTCACTGTT CCGTCAACAA 
    AAACCCTAAA CTCTCCTTCC GCCGCCGTGG CAGTTTCTGA TGACTCAGAG 
    TCAGAGAAGC AGTCATTCGT CTTAACCAGG CGGAAGAAGA AAGAAGGTGC 
    TGCTGAATCA CCGGCAGTGA AGTCAGGGAA GAAAGAAGGT GCTGCTGAAT 
    CACCGGCAGT GAAGTCAGGG AATAACGAAG GTGCTACTGA ATCACCGGCG 
    GTGAAGTCAG GGAAGAAGCG AGCTAGCGAA GGAACCACGT CAAGGGACAT 
    GCATGTCAAA AGAATTAAGA AAGAGGGCGA TAACAAAAAG GGGCATGCTC 
    AGAGAGTATG GAGTGAAGAA GACGAGATCT CTCTCCTGCA AGCAATGATC 
    GATTTCAAAG CTGAGACAGG TACAAGTCCT TGGGATCATA AGGATAGGTT 
    TTTTGATATC GCCAAGAAAT CTATAAGCTT TGATGTTAGT AAAGTCCAGT 
    TCTTTGACAA GATTAGAAGC TTTAAGAGAA AGTATTTTGG TGACCGGAAG 
    GTGAGAAGTG TTGAATCGGA TCATGATAAG AAGTGTTTGG GTTTGGCTGT 
    TTCTTTTTGG GGATCTGATG GTGTGAGCCT TGAA

AT4G00238.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00250.1); Has 934 Blast hits to 678 proteins in 131 species: Archae - 0; Bacteria - 25; Metazoa - 209; Fungi - 135; Plants - 261; Viruses - 3; Other Eukaryotes - 301 (source: NCBI BLink).
Link
InterPro Scan - TAIR