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ET13514

CSHL Arabidopsis genetrap mutant lines

Original: ET13514

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET13514

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16380670 [Map]; Strand: w
      • AT4G34215.2 - [+] show detail - Domain of unknown function (DUF303)
        Distance: 0; Region: exon1 (CDS)
      • AT4G34215.1 - [+] show detail - Domain of unknown function (DUF303)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13514 - 3-prime edge 
    AATGAAACGT AGAGTATTTT ACCGACCGTT ACCGACCGTT TTCTCCCTAC 
    GGGGACATAT GGATCGTTTG ATTAAGACCT CCGTCATGAT CTCAACCTTC 
    CTTCTCTTCC A

AT4G34215.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF303)
Curator Summary
Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds.
Computational Description
Domain of unknown function (DUF303) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT3G53010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G34215.2

Model type
Protein coding
Short Description
Domain of unknown function (DUF303)
Curator Summary
Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds.
Computational Description
Domain of unknown function (DUF303) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT3G53010.1); Has 345 Blast hits to 345 proteins in 104 species: Archae - 2; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
Link
InterPro Scan - TAIR