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ET13517

CSHL Arabidopsis genetrap mutant lines

Original: ET13517

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13517

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23621868 [Map]; Strand: c
      • AT5G58430.1 - [+] show detail - exocyst subunit exo70 family protein B1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13517 - 3-prime edge
    AATGAAACGG TAGAGGATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    ACTAACAGCA ATCCTAGGTC TCCATCTTTG ACTTTCTGAA CAATGTATCT
    CCCATTATTC ATCAGAAACA CATAGCACAA AGCTGGATCT TTGTACACTT
    TAGATTTTAC TTCCAAGTTA CTCTCTAGAA GCTCCATGAT CCAAGACATC
    TGTACAGTCA ACAGAGTTGA ATCTTTAGAA GGGACACCAT TGCTTTCCTC
    AAACACTTGC TCTAAGGTTT GCCGGGATCT ACAAGCCGCA CGGAGGTAAT
    TCATCACATA ACGAGTGATC GGGTGGAGAC CACCGCCCGG AACCGCAGCT
    TTAGCCGGGT CTCGCCGGAT CAAATTCTCA AGCTCCATAA ATATACCTCT
    TATCGCCTCT CCCAACCGTT TCCAAAT

AT5G58430.1

Model type
Protein coding
Short Description
exocyst subunit exo70 family protein B1
Curator Summary
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Computational Description
exocyst subunit exo70 family protein B1 (EXO70B1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: plasma membrane, exocyst; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein B2 (TAIR:AT1G07000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR