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ET13524

CSHL Arabidopsis genetrap mutant lines

Original: ET13524

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13524

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3862926 [Map]; Strand: w
      • AT5G11960.1 - [+] show detail - Protein of unknown function (DUF803)
        Distance: -1411; Region: intergenic
      • AT5G11970.1 - [+] show detail - Protein of unknown function (DUF3511)
        Distance: 145; Region: intergenic
    Flanking Genome Sequence: ET13524 - 3-prime edge 
    TTTTACCAAG AGATAGGTAT CCAGATCCTC ATCTTCATCT CACTCGACCA 
    GATCCATACT TGCTTGGTTT ATCATCTCTA TTGTATACAA TTAGGTTTTG 
    ACATGGTTGA GTTTTTGTGA TTGGCTTGTT ACATCTGGTA GTTAATTATG 
    TTCACATCAT TTTGGTGATC ATCCATTCGA ATCAGAAGCT CTGCTTTTAT 
    TGAACAAGAG CAGTTTATTT TTTGCGTGTT TGAATGATTC TTAAGTACCA 
    TTTTAGAGGC AATCCAACAT GTTTCTTAGA TCTCAAGTTC TGTTTCTGTT 
    AGATCTTGAG ATCTTATAAA GCATGTTTCT GTTAGTATGA TCTCGAGTAA 
    AAAGTTGGCT TTTGAAAAGC TGACAATAAC TCGGTTTATT TGGGGACCAT 
    TTCTCTATTT GTATGTGTCA TTCTTATTTA GCTTACTTTG TCGATTTTGA 
    CTTTTGATCT GAGACTGCAC TTGGAAGACT ATAATCTTAA TTAACTAAGA 
    TTAGGTGAAA TTTTTCACTG ATTAGTTCTT TGAACAATAT CACAAACTTG 
    TGGCAGACGC AGACTCATAC TATTTCCATA TCACAACTGT TTCAAGTCTC 
    TTCAATATCA TCAACAAAAC GAATTAGATA ACCAAAGCAA TCAACGAAAT 
    TATATATCGC CTCCTCGACT ATCCAGTTTT CG

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3862994 [Map]; Strand: w
      • AT5G11960.1 - [+] show detail - Protein of unknown function (DUF803)
        Distance: -1479; Region: intergenic
      • AT5G11970.1 - [+] show detail - Protein of unknown function (DUF3511)
        Distance: 77; Region: intergenic
    Flanking Genome Sequence: ET13524 - 5-prime edge 
    CCTACTTTCT CCCTGCCAAG AGATTCGGAT ACCAATAGGT AAGAGATAAT 
    GACGAATGGT AACGAGAGAA GGAGGATTAG TCCACGTAAA AGGCTTCCAG 
    CTTCAACAGC GACCAGCATG AAGTAAGGGA AGGAGCTTCT TGAGAGAAGC 
    AGAGTCCCGT CAAGATCGGC GGCTATCGAA TCGTACTCTC CGTCTCTGCA 
    TTCCGTTATT GGAGGGAAGT TTTGACTCTT CTCTTCACTC GACCAAAGAA 
    AGAGAGAGAG AGAGCACAAT CATAATTACT TGAGAAAATC AAAATTCAAA 
    ACAAAGCTCA AGAAGAAGAA AAACAAAGTA AAAAAGTAAA AATTATAGAA 
    AAAGATGAAA AAAGAATCAC CACCAACCAT AGACGACCTG TGTGTACCTC 
    TGCTTAAGCC ATCTGAAACT GTTTCTAAAA GAGCCTTTGA CTTTGCCTTC 
    AACACCATAC ATCTTATAAC TCGCGACCCG TTTCTTCCTC TGGAGCTCCG 
    GATCCGTTAT TCCCCAAGAC TTGGATCTTG CTATCGATTT CTCCTTTTTC 
    ACATCGTATA TATT

AT5G11960.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF803)
Computational Description
Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G11970.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3511)
Computational Description
Protein of unknown function (DUF3511); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3511 (InterPro:IPR021899); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3511) (TAIR:AT2G19460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR