1. Home
  2. Mutant Lines
  3. ET13525

ET13525

CSHL Arabidopsis genetrap mutant lines

Original: ET13525

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13525

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21680611 [Map]; Strand: w
      • AT3G58620.1 - [+] show detail - tetratricopetide-repeat thioredoxin-like 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13525 - 3-prime edge 
    GTATCCAGAT CCTCATCTTC ATCTCACTCG ACACTGAGAA GTGACAGCGG 
    GTTTTCCGGA AGCAGAACCA GAGGAGCTTG AACTGCTGCC ACTAGCGGCG 
    GGAGTGGCAG CGGCGGAGGA GGAGCCACGA GGCCTCAACG GAGAACCAAA 
    ATCGAGTTCT CGGAAATCTG GTTTGTTGAT GACGTCATCG TCTCGTTGGA 
    AACTCAAAGA ATCACGGAAT TTACTGGTAA TGGAAGGTTC TAGCGAATGT 
    CTTCTATAAT GTGACATCTT CTCGAAACCA AAGCCTCAGA ATCAATAAAC 
    ACAGAGAATC AAGAAGAAGA ATTGGTGAAG AGAGAGAAGA GAGATTGTTG 
    TGATATATAT AAAAAGGAAG CAGAAGAATG AGAATGAAGA TGTTGAAATC 
    AAAAATAATT TTCGATTACC GTTAAAAAAA TATTATTAGT TTAAGTAAAA 
    CGACTAATTG CCAGATTAAG ACATTGATCT TTCTTAG

AT3G58620.1

Model type
Protein coding
Short Description
tetratricopetide-repeat thioredoxin-like 4
Computational Description
tetratricopetide-repeat thioredoxin-like 4 (TTL4); FUNCTIONS IN: binding; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Tetratricopeptide TPR2 (InterPro:IPR013105), Tetratricopeptide repeat-containing (InterPro:IPR013026), Thioredoxin-like fold (InterPro:IPR012336), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopetide-repeat thioredoxin-like 3 (TAIR:AT2G42580.1); Has 21785 Blast hits to 12872 proteins in 1130 species: Archae - 748; Bacteria - 6255; Metazoa - 5785; Fungi - 2015; Plants - 2355; Viruses - 3; Other Eukaryotes - 4624 (source: NCBI BLink).
Link
InterPro Scan - TAIR