1. Home
  2. Mutant Lines
  3. ET13526

ET13526

CSHL Arabidopsis genetrap mutant lines

Original: ET13526

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13526

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 15199525 [Map]; Strand: c
      • AT5G38096.1 - [+] show detail
        Distance: 0; Region: intron1 (NonCoding)
      • AT5G38100.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: ET13526 - 5-prime edge 
    TGGCGCTGAA AAGAAAACAA GAGCATGTAT CTTAGAAAAT ATCGATCTCC 
    AACTGAATTC CAATCTTAGT ACTTTTAGAA TTGCAGATTT TGGTTGCTCT 
    ACTGGACCTA ACACGTTTCA AGCTGTTCAA AATATCATTG ACATGGTGAA 
    ACACAAACAC TTGAAGGAAA ACAACGAAAA TAGCCTTTTG CCTCTCGAGT 
    TCCAAGTTTT CTTCAACGAT CAACCCAACA ATGACTTCAT CCTCACTCGA 
    CAAAACACAG TCTCCTTCCT CGGAACGGGA ATATTTCTCG GTTGGAGTTC 
    CAGGGTCCTT CTATGGCCGA GTGCTACCAA GAAACAGCAT CCACATCGGA 
    AACACGTCTT ACACAACTCA TTGGCTTTCC AAAGTTCCCA AACATGTATG 
    TGACAAGAAA TCTCCGGCCT GGAACAAAAA TTACATTCAC TGTAACAATT 
    TATTAGAAGA TGTGACCAAG GCTTACAAAG TTCAGTTCAT AGAAGACATG 
    GGGGCTTTTA TTGACGCTAG AGCGGAAGAA CTTGTGCCTG GTGGATTAAT 
    GATTATTTTA CGTCAATGTT TGCCGGATGG CGTGCCCCTG TATGAAACAT 
    GGCAGGGTAA T

AT5G38096.1

Model type
Pseudogene
Curator Summary
Pseudogene of AT5G38100; methyltransferase-related protein
Link
InterPro Scan - TAIR

AT5G38100.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G38780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR