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ET13528

CSHL Arabidopsis genetrap mutant lines

Original: ET13528

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13528

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17731836 [Map]; Strand: w
      • AT4G37740.1 - [+] show detail - growth-regulating factor 2
        Distance: -4106; Region: intergenic
      • AT4G37750.1 - [+] show detail - Integrase-type DNA-binding superfamily protein
        Distance: -7678; Region: intergenic
    Flanking Genome Sequence: ET13528 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCC 
    ACGTATGATA CATATGTTGA ATCGTTAATT TAAATAGCAG AAAAAAAACT 
    TTCAGATTTT AATCAATCGT TTTTATCATT TTTTAAAAAG TGTAATTTAA 
    TTGTGATAGT CAATTCGAAT GGTAGCAAAA GTACCACTTA ATATAATCCA 
    ATCGAATTGT GTACAAGCAC TCATCCAAAC AGACTACAAA TTTGGTTTGA 
    TTACTTTAAT TTTTTAAAAG GTTACATCAG ATCAGACCAA AGAAACTCTA 
    ACCGAATTAA CTACATAAGT AAATATAAAA TAGAATTAGT ACCTGCTATG 
    GTGAACAAAG AACAGTTCAA CTGAATTTAC TAGTAACAAA AAGTACTAAA 
    CATATGGCGT CGAATAATAT TATCACAAGG AACGAAGGGT TTATTGGTTT 
    TCTTTGCTAC TTCATACGTC CCTTCTCTCA GCCACTCTCG TTTTCAGCTA 
    TTTCTCTTAC ATTCCATATT ACTCCTTTTA CGTTTTTAAT AACCAAAACC 
    ACACCTAATT ACCTATTAAC CAAC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17731886 [Map]; Strand: w
      • AT4G37740.1 - [+] show detail - growth-regulating factor 2
        Distance: -4156; Region: intergenic
      • AT4G37750.1 - [+] show detail - Integrase-type DNA-binding superfamily protein
        Distance: -7628; Region: intergenic
    Flanking Genome Sequence: ET13528 - 5-prime edge 
    TCCTACTTTC TCCCTTACTA CGCAGCACTT GAACTACACT AACTACAATT 
    AATAACTACA TCAATCGCAC TGACAGTAGT ATATTTTAGC ATCATATTAC 
    GGATTTACAG TTTTCCATTA GTTTAAAATA TTTCAACTAT ATTAAAAAAA 
    AAAAGCTTCA TTTCCGGCAT ACCTCCCATA GGGAAAATTA TCGGAGGAAA 
    ATGGTTCCAA AACCCACCCC ATAAAAAAAT ACGGGTTTAT ATTTACCCCT 
    GGAAAAAGGC CTTTAACCGG TCCAATGGGG GGGGAAAGGG GGAACCAAGG 
    AATTACCGGT TGGTGGGAAG GAAGCATAGC CCCATAAACA GGCTGGGGCC 
    CAAATCATAT CTCCAAAACG GGTTTTTAAA CCTTTAAAGG CCAATTTTGG 
    AAAAAAAGAG CCCAATTGGA CCCCAACCTT TCCTTCAAAA GGGAGGGTCC 
    GAAGGGAAAC AGGGGACCCA ATAAGACATC AAGGCTGGGG CCCCTTCCCA 
    AAACATTCCC AAATCCCCAT CCCCTTAAGG GTTATAAAGC CTATACCGAA 
    TAAATAGGTA TGGAATCCAT AGGGGCCCCC ATTCCAATTC CATCAGGGGG 
    GC

AT4G37740.1

Model type
Protein coding
Short Description
growth-regulating factor 2
Curator Summary
Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower
Computational Description
growth-regulating factor 2 (GRF2); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 1 (TAIR:AT2G22840.1); Has 745 Blast hits to 714 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 24; Plants - 532; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G37750.1

Model type
Protein coding
Short Description
Integrase-type DNA-binding superfamily protein
Curator Summary
ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia.
Computational Description
AINTEGUMENTA (ANT); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G72570.1); Has 7251 Blast hits to 5191 proteins in 264 species: Archae - 0; Bacteria - 9; Metazoa - 18; Fungi - 8; Plants - 7086; Viruses - 4; Other Eukaryotes - 126 (source: NCBI BLink).
Link
InterPro Scan - TAIR