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ET13531

CSHL Arabidopsis genetrap mutant lines

Original: ET13531

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13531

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 186933 [Map]; Strand: w
      • AT4G00430.1 - [+] show detail - plasma membrane intrinsic protein 1;4
        Distance: 0; Region: intron1 (CDS)
      • AT4G00430.2 - [+] show detail - plasma membrane intrinsic protein 1;4
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: ET13531 - 5-prime edge 
    CTTTCTCCCT GGCTACAGCA GGGTTGATGT GTCCACCTAA AAACACACAA 
    ACACAAACAC ATGTTACAGA AAGATGTGAG CTTTTATCTG AGAAATCAAC 
    AGTAAAATTG GTGTAACATA CAGATCTAGA TAAGCCCAAG CATCAAAAGA 
    ACCCAAAGTT TCCTGCTTTA TAACTGTTTT TGGTTCCTTT ACATTTTCTA 
    GGTCAAACAG AGCATGAACA AAAACAGAGG ACTCACATAA TGGTTTTCAG 
    AAACAAAACA GAGCAAATAA AGCAGAACCA AAACAGAGAA CCCACCAAAA 
    CAGAGATTAC AGAAAAATGG GAAAATCGAG AGAAGGTTAC CTGAAATTCC 
    AGCAGTACAG TAGACAAGAG CAAAGATCAT GCCACCAAAA GCCCAAGCGA 
    TACCTTGGAT TCCAACAGAA GCACACATGT TTGGTGCTCT CTTAACTCCC 
    ATTACAGTCA AAACAGTGAT GTAGAGAAAC AAGAAAGTAG CGATAAACTC 
    AGCTATTCCG GCTCTGTAGA AAGACCATGA GCTGAGCTCG CCGGGCTCGA 
    ACAGTGGCGC AGGAGGTGGC TCTTTGTAGT CCTTGTCGGT GGACTGAGCC 
    GATGTACCGA TGGGTTGCCT CTCCGGGAAC TTGTTAGCTC CCACTCGTAC 
    ATCTTCTTCT TTGCCTTCA

AT4G00430.1

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 1;4
Curator Summary
a member of the plasma membrane intrinsic protein subfamily PIP1.
Computational Description
plasma membrane intrinsic protein 1;4 (PIP1;4); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.1); Has 10702 Blast hits to 10683 proteins in 2216 species: Archae - 88; Bacteria - 5147; Metazoa - 1472; Fungi - 442; Plants - 2512; Viruses - 2; Other Eukaryotes - 1039 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00430.2

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 1;4
Curator Summary
a member of the plasma membrane intrinsic protein subfamily PIP1.
Computational Description
TRANSMEMBRANE PROTEIN C (TMP-C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR