1. Home
  2. Mutant Lines
  3. ET13535

ET13535

CSHL Arabidopsis genetrap mutant lines

Original: ET13535

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13535

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 187052 [Map]; Strand: w
      • AT4G00430.1 - [+] show detail - plasma membrane intrinsic protein 1;4
        Distance: 0; Region: intron1 (CDS)
      • AT4G00430.2 - [+] show detail - plasma membrane intrinsic protein 1;4
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: ET13535 - 5-prime edge 
    CAGATCTAGA TAAGCCCAAG CATCAAAAGA ACCCAAAGTT TCCTGCTTTA 
    TAACTGTTTT TGGTTCCTTT ACATTTTCTA GGTCAAACAG AGCATGAACA 
    AAAACAGAGG ACTCACATAA TGGTTTTCAG AAACAAAACA GAGCAAATAA 
    AGCAGAACCA AAACAGAGAA CCCACCAAAA CAGAGATTAC AGAAAAATGG 
    GAAAATCGAG AGAAGGTTAC CTGAAATTCC AGCAGTACAG TAGACAAGAG 
    CAAAGATCAT GCCACCAAAA GCCCAAGCGA TACCTTGGAT TCCAACAGAA 
    GCACACATGT TTGGTGCTCT CTTAACTCCC ATTACAGTCA AAACAGTGAT 
    GTAGAGAAAC AAGAAAGTAG CGATAAACTC AGCTATTCCG GCTCTGTAGA 
    AAGACCATGA GCTGAGCTCG CCGGGCTCGA ACAGTGGCGC AGGAGGTGGC 
    TCTTTGTAGT CCTTGTCGGT GGACTGAGCC GATGTACCGA TGGGTTGCCT 
    CTCCGGGAAC TTGTTAGCTC CCCACTCGTA CATCTTCTTC TTTGCCTTCC 
    ATTTCTCTCC CTCTCCCTCT TTTG

AT4G00430.1

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 1;4
Curator Summary
a member of the plasma membrane intrinsic protein subfamily PIP1.
Computational Description
plasma membrane intrinsic protein 1;4 (PIP1;4); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.1); Has 10702 Blast hits to 10683 proteins in 2216 species: Archae - 88; Bacteria - 5147; Metazoa - 1472; Fungi - 442; Plants - 2512; Viruses - 2; Other Eukaryotes - 1039 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00430.2

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 1;4
Curator Summary
a member of the plasma membrane intrinsic protein subfamily PIP1.
Computational Description
TRANSMEMBRANE PROTEIN C (TMP-C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR