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Mutant Lines
ET13541

ET13541

CSHL Arabidopsis genetrap mutant lines

Original: ET13541

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13541

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 8181310 [Map]; Strand: w
- AT1G23080.1 - [+] show detail - Auxin efflux carrier family protein
  Distance: 0; Region: intron3 (CDS)
- AT1G23080.3 - [+] show detail - Auxin efflux carrier family protein
  Distance: 0; Region: intron3 (CDS)
- AT1G23080.2 - [+] show detail - Auxin efflux carrier family protein
  Distance: 0; Region: exon3 (3UTR)

TTTTACCGAC CGTAGATTCA TCATCATTTA TTGGATTTAG ATTACGTTTA 
CATGTATTGC ATGATTCAGC ACTTGTTGTT TTGAGTGGAA ATGAATTAAC 
TGAAAATGTG AAAATGGTGA AGGGTTGTTC ATGGCATTGC AACCGAAATT 
AATTGCTTGC GGAAATTCGA CGGCGACTTT TGCGATGGCG GTGAGATTCT 
TTACTGGACC AGCGGTAATG GCCGTGGCAG CAATGGCTAT TGGATTACGT 
GGAGACCTAT TGCGTGTGGC CATTGTTCAA GTAAATTAAA CTATTTTCGT 
TTGTTGTTAA CAATCTCTTT GTAAGAAGTA GTTTAACCAA ATCTTGTGGT 
AACGTTGTAG GCTGCATTGC CTCAAGGGAT CGTGCCGTTT GTGTTTGCAA 
AAGAGTATAA TGTTCATCCC GCAATCTTGA GTACAGGGTA AGTATTTCAT 
ATTGAACCAA TAGTAAAACT TTTCTTATGC ATAAGAGAAG ATTACTAATA 
TTGTTGATTC TTATGTGTAT TATTGCAGGG TAATATTTGG AATGCTTATC 
GCACTACCGA TTACACTTGT TTACTACATT TTACTCGGGC TATAAGCTCT 
TCAATGGAGA AGTTCTGCTT GGCTGANGAG GATAAAGAGA AACAAGATAA 
TTCCAAGATT AGTGGAACGC AACTAGAAAA TGTAATGTAA CACGAAATGT 
AGTAAATTTA AAGGGACCAA GATTTGATTT GAGGATCCAA AAACCCTTT

AT1G23080.1

Model type: Protein coding
Short Description: Auxin efflux carrier family protein
Curator Summary: Encodes a novel component of auxin efflux that is located apically in the basal cell and is involved during embryogenesis in setting up the apical-basal axis in the embryo. It is also involved in pattern specification during root development. In roots, it is expressed at lateral and basal membranes of provascular cells in the meristem and elongation zone, whereas in the columella cells it coincides with the PIN3 domain. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. PINs are directly involved of in catalyzing cellular auxin efflux.
Computational Description: PIN-FORMED 7 (PIN7); FUNCTIONS IN: auxin:hydrogen symporter activity, transporter activity, auxin efflux transmembrane transporter activity; INVOLVED IN: response to cyclopentenone, root development, pattern specification process, auxin polar transport, longitudinal axis specification; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G70940.1); Has 1748 Blast hits to 1583 proteins in 451 species: Archae - 37; Bacteria - 919; Metazoa - 14; Fungi - 2; Plants - 486; Viruses - 0; Other Eukaryotes - 290 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G23080.2

Model type: Protein coding
Short Description: Auxin efflux carrier family protein
Curator Summary: Encodes a novel component of auxin efflux that is located apically in the basal cell and is involved during embryogenesis in setting up the apical-basal axis in the embryo. It is also involved in pattern specification during root development. In roots, it is expressed at lateral and basal membranes of provascular cells in the meristem and elongation zone, whereas in the columella cells it coincides with the PIN3 domain. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. PINs are directly involved of in catalyzing cellular auxin efflux.
Computational Description: PIN-FORMED 7 (PIN7); FUNCTIONS IN: auxin:hydrogen symporter activity, transporter activity, auxin efflux transmembrane transporter activity; INVOLVED IN: response to cyclopentenone, root development, pattern specification process, auxin polar transport, longitudinal axis specification; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G70940.1); Has 700 Blast hits to 605 proteins in 126 species: Archae - 0; Bacteria - 174; Metazoa - 8; Fungi - 2; Plants - 457; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G23080.3

Model type: Protein coding
Short Description: Auxin efflux carrier family protein
Curator Summary: Encodes a novel component of auxin efflux that is located apically in the basal cell and is involved during embryogenesis in setting up the apical-basal axis in the embryo. It is also involved in pattern specification during root development. In roots, it is expressed at lateral and basal membranes of provascular cells in the meristem and elongation zone, whereas in the columella cells it coincides with the PIN3 domain. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. PINs are directly involved of in catalyzing cellular auxin efflux.
Computational Description: PIN-FORMED 7 (PIN7); FUNCTIONS IN: auxin:hydrogen symporter activity, transporter activity, auxin efflux transmembrane transporter activity; INVOLVED IN: response to cyclopentenone, root development, pattern specification process, auxin polar transport, longitudinal axis specification; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G70940.1); Has 1749 Blast hits to 1582 proteins in 451 species: Archae - 37; Bacteria - 920; Metazoa - 12; Fungi - 2; Plants - 486; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink).
Link: InterPro Scan - TAIR