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ET13564

CSHL Arabidopsis genetrap mutant lines

Original: ET13564

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13564

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 6026583 [Map]; Strand: w
      • AT2G14220.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET13564 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    AAATGGAACC GAGTTCACAA GTTTGGCAAA CTATTTTCGA CAGCAAGGGA 
    TTCTTTAAGA GACTTCCTGT GTGGGTACAC CACAACAAAA TTGAAGAGCC 
    GAACGCAAAC ACCGACACAT TCTGAATGTG GCAAGAGCAT TGCGCTTTCA 
    AGGACACTTA CCAATCCAAT TTTGGGGTGA GTGTATCCTC ACAGCTGGTT 
    ATTTAATTAA TCGTATTCCT TCATCAGTTC TGAATGGTCT AACACCATAT 
    GAGAAATTGT ATAAGAAAGA GCCCGATTAT ACACATCTCA AAGTATTTGG 
    GAGCTTGTGC TATGCTCATA ATCAAGGTCA TAAGGGAGAC AAGTTTGAAT 
    CGAGAAGTTG AAAGTGTGTG TTTGTTGGCT ATCCATATGG CAAAAAGGGT 
    TGGAGGCTAT ATGATTGCGA AACAGAGGAG TTTTT

AT2G14220.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 1.6e-167 P-value blast match to GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)gi|4996361|dbj|BAA78423.1| polyprotein (Arabidopsis thaliana) (Ty1_Copia-element)
Link
InterPro Scan - TAIR