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ET13582

CSHL Arabidopsis genetrap mutant lines

Original: ET13582

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13582

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23840502 [Map]; Strand: c
      • AT5G59050.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: intron3 (CDS)
      • AT5G59050.2 - [+] show detail - unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Arch...
        Distance: 0; Region: exon2 (3UTR)
    Flanking Genome Sequence: ET13582 - 3-prime edge 
    TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TAGGTGTGAG 
    AATTTTAAGT TTCTATCTAA TACGGGACTC GAATATAATA CTATATTTAG 
    AAAGAAACAA AGTTAACACT ATGTGGTTTG GTTTATAGCC TTGGGTAATT 
    GTCAATGATC GAACGGTGAC AAATAAAGAA TCACAAAATG AATAAATATC 
    TAGGGTATCT TAGATTATAA TCCACCTATT GAATGAAACT AGTGGGTCTT 
    ATAAGAAAAA AATGAATGAT TTTGATTGAT TTTTGAACCT AAATGGTTTA 
    TTTTTGTTGA TAGTGAAAGG GAGACAAATG GGGACCAACT AGTTGAGGGA 
    AGATTCTAAT TTAGGAGGGT GTATCTGTCA AACCAATAGC CACACAATAG 
    ATTAATTGGT GACAAGGAAT CTTTGGAATC TTACTCAGTC AAACAAGGTA 
    ATAATGTACG CAAGATTCTT ACTATAATAT AAATTTTGTC CTAAATAATT 
    GAGTTTTGAG CTTTTACTCA ATCAGCTAAC CTTAACCCAA CCTAACCTTA 
    ACCCAACTAA TAACCATTCA CATTATTTTA TGTCACAACT CTTTAAGATT 
    CTTCTAACAC TTAAGTATAG TTAAATCGAA AAAAAAAAAA AACCTTTTGG 
    CTAAAAATTT TCCCCCCCAA AAAAAGG

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23840448 [Map]; Strand: c
      • AT5G59050.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: intron3 (CDS)
      • AT5G59050.2 - [+] show detail - unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Arch...
        Distance: 0; Region: exon2 (3UTR)
    Flanking Genome Sequence: ET13582 - 5-prime edge 
    TTCATCCTAC TTTCTCTCTG TCTACACCCA CATGTAGCAC TTACCAGGTT 
    TGTTGATGAT GTTCTTTCAA CACAAAGGAT TATACTTAAC AACTCTCAAG 
    ATTAAAGATT TTCTGACAAT TTCATTTTCA AGTCTTAACC GTTACCCAAT 
    CTAGGAGTCG GTGAGTTTGT CAACTAAATA TCAACCACCA TTTTTTTTAG 
    AAATCATTCT TGTTTTATCA TCATATGTTT TGACGTGGCT TGGATATTGG 
    TGGGTGGTGG TGACAATTTA CTATTTATTG TACTGTTTGT ATTCATATTC 
    TCTCGACGAT CGATGAAACT GATGTTTCAA CCAAACAGTT TTATGAGTTG 
    TTACTCTGAA ATTGCCTAAC CGGTTTAAGT TTGGTTAGAT GTAGTTTTGG 
    TTTTGGTTTT GACTTTTGTG TATGGAAATA AATTGGTTGC AGGATGTTCA 
    ACAGTAATAA TACCAGCAAG AGTAGTTGAA GCCTTGAAAG TTCACTTTGA 
    CAAATTGGGT GTTCCTTCTA CATTCTCTTC TGATATCCCT CCTTTTCATG 
    GTACCAACCC CACCTATCTC TTTCCTAATT TCATTTCTTG TGTTTCTTAT 
    TCTTTAAAGT AAAGTTATGA TTTACAAGAA TTAGATAAA

AT5G59050.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59050.2

Model type
Protein coding
Computational Description
unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR