Home
Mutant Lines
ET13584

ET13584

CSHL Arabidopsis genetrap mutant lines

Original: ET13584

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13584

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 1; Position: 30146426 [Map]; Strand: w
- AT1G80140.1 - [+] show detail - Pectin lyase-like superfamily protein
  Distance: -185; Region: promoter

AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTATCC 
CCGACCGTTG CATATTTCGT CACTGATTTA CTATAGCTTA ACCCGGGAAA 
TCCTAAAATT GCAACGAGTA CGATCAAAAA CCAATCCTAC ACATATGTAC 
AAAAAGAGGA TTAATATTTT AAAAATCAGG TTCAATGTTA GTAGATATAG 
GCAACGAGTC TTACCATTTT AACGAGAAAT GGATCGATCT AAGCAGAGTT 
GAATAGTGGA TTACTTTCAG ATTGTCTTAA GGTATATATA AACACACAAC 
ATAAGGGATT GATTCAAATA TCACATTAGT AACATAACAG CATTGGATAT 
AAATGCATGC ACTCTGTTTG GTTTTCTTAA ATTTTTAGGT ATCTATTTAT 
GGATATATTC TCTGAATGTA TTTCATTTGT AGACTTAATT TTCCTCTAAT 
ATCGGAGTGC CATCCAAGGA TTCTGTGTAC TGATTCTTGA AAGTTCAATG 
AATTTTCCAG CAATAAAGGA AATAGGCATT TGTTTTTAAA TCGAAGTTAA 
TATTTCAAAT TAATAAAAAG ATTAATCAAG AAGTATGATG ATATTAAGGT 
GCTCTGTTTA CCTTCTTATC ACGAAAAATA ACGTGTCTTG GTTAGCATGA 
AGATCAATGA TTCA

3 prime edge [+] show sequence

Chromosome: 4; Position: 288738 [Map]; Strand: w
- AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
  Distance: 0; Region: exon1 (CDS)

TTCCTCCTCT TTCTCCCTGC GTGCACCAGA GCCGTCGTCA CGGGAGTCTT 
CCATGTGCAC ACTTGTTCCA TCCATTTCCA AACAGACAGC GCACCGGAGA 
ACACTGTCGT GAACCTATTG AAGTTGGCTT TGCTTCTCCT CATGCTGAAC 
AGCTGACTTT TCCAATCTGT CAAATAGTCA ACCACTTCCC GTCTCAGCGG 
TGGCTCGGAC CGGCCTAAAC GAACAATAAT TATGTTGATA GCCTGCATCT 
TAAGAGCTTC CTGTTGGTTT GTGGATAAGG GTACTATGCA ATGCATCTTA 
GGCACGAGAG GTTTTGTGTA TTT

5 prime edge [+] show sequence

Chromosome: 1; Position: 30146500 [Map]; Strand: w
- AT1G80140.1 - [+] show detail - Pectin lyase-like superfamily protein
  Distance: -111; Region: promoter

GATGGCAATT GTCGATGATA CATCTGTAAG TTATTGGTGT ATATATATTA 
TATATCAGTA CAAGCAGCAT AATTATTTAG TCATCATATA AAAAAAATTG 
AACTTTTGCA TGGTATATGT GGGCAAAAAA AAACAAGGCG TTCCAAAAGG 
CGTGGGAGGA TGCTTGTAAG GGAAGCTCCA AAATGGGAAG TGTAAACGTA 
CCAGCAGGGA AGGTGTTCCT CCTCAACTCC CTTCATTTCA CTCGACCATG 
CATACCCAAA CCTCTCCTTT TCATTGTAAA TCCCTCCACC ACTTTCCTTG 
ATTGATAT

AT1G80140.1

Model type: Protein coding
Short Description: Pectin lyase-like superfamily protein
Computational Description: Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, leaf; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Parallel beta-helix repeat (InterPro:IPR006626), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G70500.1); Has 3888 Blast hits to 3869 proteins in 461 species: Archae - 6; Bacteria - 1036; Metazoa - 13; Fungi - 1239; Plants - 1472; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00700.1

Model type: Protein coding
Short Description: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR