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ET13598

CSHL Arabidopsis genetrap mutant lines

Original: ET13598

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13598

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17204323 [Map]; Strand: w
      • AT2G41250.1 - [+] show detail - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
        Distance: -1705; Region: intergenic
      • AT2G41260.2 - [+] show detail - glycine-rich protein / late embryogenesis abundant protein (M17)
        Distance: -2187; Region: intergenic
    Flanking Genome Sequence: ET13598 - 3-prime edge
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTACCAAAAA 
    CAATCGCACA ATACCAATTC AAACCCTCCT CCTTCTTTTG GTAATATCAC
    TAAAATTGAT CTAAATGAAA GAAAAGAAAG CAAAAAGGGA TTAGAAACAG
    AAACCATGAA CCGACCGGTA TAGGAGATAG AACTGAAATA GCACTACTTA
    GACCAAATTC AACATTTCTG ATAAAATAAC CTAACCAAAC CATTATCTAA
    GCAAGAGAAG AGGCTAGCAT AATGATTAGA AAACGTTACT ACTTTTTAAA
    AATGGGTATC GAACGTTACT ACGTTAGACA CTCGAGTTCA GAGAGATCTT
    CATTACTGGC GTTTAAGACG TTTCATCTAT TTCCCGAGTG ATCCTTTTTG
    AACCCTTGGA TGTTCTTCTT ATTCTTATTT TACCAAATGA ACTTTCCAAG
    TAAGTAAACA TTATGAATAA ATCATATGCT TCGAAATCTA TTTAATATTT
    AACTGTTAGT TTTACTGGAA AAGGTTGGAT AAAGAAAAAC TTGAGAAAAA
    ACTACTCACT GTCAAACTAT CATATTTTAT CATTTTATGA ATCGAGAACG
    GGTCTCGACC AAGACGACAA AATCACTTTC TATACCACCA CTTGGTTAAT
    TAGATGGGTT AGTACGATCC CATGATCTTT CTTGGAAGAT TTT

AT2G41250.1

Model type
Protein coding
Short Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Computational Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity, phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), HAD-superfamily hydrolase, subfamily IA, REG-2-like (InterPro:IPR011949), HAD-superfamily hydrolase, subfamily IA, variant 1 (InterPro:IPR006439); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G14310.1); Has 5345 Blast hits to 5345 proteins in 1611 species: Archae - 258; Bacteria - 4323; Metazoa - 249; Fungi - 67; Plants - 142; Viruses - 0; Other Eukaryotes - 306 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G41260.2

Model type
Protein coding
Short Description
glycine-rich protein / late embryogenesis abundant protein (M17)
Curator Summary
Late-embryogenesis-abundant gene. Involved in the acquisition of desiccation tolerance during late phase of embryogenesis.
Computational Description
M17; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development; LOCATED IN: endomembrane system; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: late embryogenesis abundant protein (M10) / LEA protein M10 (TAIR:AT2G41280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR