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ET13617

CSHL Arabidopsis genetrap mutant lines

Original: ET13617

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13617

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11113676 [Map]; Strand: w
      • AT4G20725.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET13617 - 3-prime edge 
    ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAATCTG AGCAAACTGA 
    TAAGTGAGGA GAGCGGGATT AAAGCAACAA AAGACTTGGG TAAATATCTT 
    GGGATGCCAG TACTTCATAA ACGCATCAAT AAGGATACTT TCAGTGAACT 
    TTTGGAGAAG GTCTCTTCCC GTTTGTCGGG TTGGAAGGAG AGAACTTTGA 
    GTTTTGCGGG ACGGATGACG CTTACCAAAG CTGTATTATC ATCTATACCG 
    GTCCATACAA TGAGTTCTAT TGCGCTACCA CAATCGACTA TTACTCGATT 
    GGACAAAGCT TCTCGTTCCT TTCTTTGGGG AAGCACGGCT GAGAAGAGAA 
    AACAACACTT GGTGTCTTGG AAAAAGGTCT GCTTACCTAA GAAAGATGGG 
    GGTTTGGGCA TTCGCAATGC CAAATTGATG AACAAGGCTC TTATTGCTAA 
    GGTTGGTTGG CGTCTGCTGC AGGACCAGTC GAGTCTTTGG GCTGAGGTCT 
    TAAGAAAAAA GTATAAAATT GGCGATCTCC GGGATTGTCA GCGGCTGCGT 
    AAGAAGGGGA CTTGGTCATC AACTTGGAGA AGCATTGTAA GAGGGCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11113767 [Map]; Strand: w
      • AT4G20725.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET13617 - 5-prime edge 
    CGTGAGACAT TCCCTGAAAA AAATATTTTT GACTTCTCCA GGCTAATCTT 
    TTGACCAGAG GCTATACAAA ATGTCTCCAG CACCTTCCGA ATCACTCTTA 
    TCTGCATTAC TGAAGCCTCC GCAAATAAAA TTAGATCGTC AGCAAAACAG 
    ATATGAGATA ACTTGGGACC GCCTTGAGAC AAACTAATGG GCTTCCACTG 
    TTTGTTATCA ATCGATCGCT CAATCTGTCA ATCAAGTGAC AAAGCCTCTC 
    CATACATAGC ACAAACAAAT ACGGAGATAA GGGATCACCC TGGCGGAGGC 
    CCCGTAACGG CTTGAAGGAG TCTGTTCTCT CTCCATTCCA CAACAAACTC 
    ATCTCCGGGC CCGACACACA GCACATTATC CATCTTACCC AAACTTCGGG 
    GAACCCCGCA GAAATAAGTG TATCCTCCAG ATAATCCCAT CGGATCCTAT 
    CATAAGCCTT CTCCAAATCC AACTTCAAAA GCATCCAGCC CTTTACCCCT 
    TT

AT4G20725.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.2e-31 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR