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ET13619

CSHL Arabidopsis genetrap mutant lines

Original: ET13619

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13619

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1440910 [Map]; Strand: c
      • AT1G05030.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: ET13619 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAACAAGA ACAGAGTTTA 
    ATCTCCTCGT ATAGAAATCA AACTAGGCCA GTAAAACAAA CAACATTGAC 
    TGTTTCTATA AAGTCACAAA TTTGGCAACA GTGAACTGGC TATATTATTA 
    CCCAATGTGA TAACCAAAGA GAAAATTGGC CATAGAAGCA ACTGATACAT 
    GAGGAAAAGC CGATAACCAT CCCAAATCAG CGGAAAATTT CTCCAGCTTC 
    TCAACTGACG GAACTGGCGA TATCTCGTGA TCGTCATCTG TTAAAATTTT 
    GAATAAAGTT TGATTTTTTT TTACAGATAA ACATTAGCAA AGAGATTGGT 
    AAGTCAATGG AGGTGAGAAA GCTGAACCTG GTTTCTTCGT CGACAATGTC 
    GTAACACGCT TCTTCCTCTT CGGAGACCGA AAGAAACGGG AAAAGGAAGA 
    GGTTTTACGA GAGTGGGCGA TTCGGGTCGG GTAAGAAAAG GTTAATCGGG 
    TCAGAGCATT GGGATGATGT AGAAGTACGG TATTCGTCAC CCACATGATC 
    GGAGAGCTAG ACTAGACGGA AGAGAGAGAA ATACGTCGGC GAAGCGAAAA 
    TAATAAATTT GAGGCGACGG AAAATAATAA ACTTGTAATC ACGTGACACT 
    CACGTGCTCA AATACTGAGT GATTTCCCTT TTATTTTTGC GTTCTCAGAA 
    TTTCCTTTTT ATTTTCTTTT TAAAATTCTT TATCAAAGTT AAATTTCCTT 
    TTCGTCGGTG ATAAACTTCC TTATAAATGG GCATGCGCGT CCAAAAACTA 
    TCCGAATGTA ATTTCGTATT TTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1440839 [Map]; Strand: c
      • AT1G05030.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: ET13619 - 5-prime edge 
    CTTTATCCCT GGTTCTTGTA GTAGTGTTAA TGCTTGGTTG TGTTATGGAA 
    TTCGAATAAA AGTTTTCATT GTGACATTGC TGATGAGACC AGCTTCAGTG 
    TGAGCTTACA AAGATGTTGA TTAGATTGTT TTTACAGAGT GTTGATTTGT 
    CCCCGTCTTG ACAATTTGTT AGCTTCCAGT GAGAAGAATA TGAGTTAGTC 
    AGGTTGATCT GGATTAGTTT TTCGAAAGCT TAGTACTTAT AATAATATCA 
    GTTTGTTCTT GCAGAGTGAT GAATGGCCCC ATCGTGTCTA TTGCGCGTGA 
    ACTTGGGTTT GAAGGCAATT CTATTCTTGA GGGTCTTGTT GTGAGCATAT 
    TTATTGCCGG TGCATTTATT GGTAGCATAG TCGCCGGTCC ACTAGTTGAC 
    AAGTTTGGCT ACCGACGCAC CTTTCAGATT TTCACGATAC CCCTCATTCT 
    TGGTGCCCTT GTGAGGTAAT ATCTTGTTAC TAAGGTGAAT GTTGATTTCG 
    TTATGTTAGT AACAATTCCA TGATGATGTT TTAAGTTGTG AGGTAGCAGC 
    ATAACAAAAA CTCGTCTTTT TTTCTCAGTG CACAAGCTCA CTCCTTGGAT 
    GAGATCTTAT GTGGAAGATT TCTTGTTGGT CTTGGTATTG GCGTCAACAC 
    AGTTCTTGTT CCAATATATA TATCCGAGGT AATCTAATAT GTGATTCCTT 
    TTCAACTTCA TGTTTTAACT ATT

AT1G05030.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrion, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: plastidic GLC translocator (TAIR:AT5G16150.3); Has 32095 Blast hits to 31550 proteins in 2260 species: Archae - 588; Bacteria - 15264; Metazoa - 5199; Fungi - 6752; Plants - 2455; Viruses - 0; Other Eukaryotes - 1837 (source: NCBI BLink).
Link
InterPro Scan - TAIR