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ET13623

CSHL Arabidopsis genetrap mutant lines

Original: ET13623

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13623

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26593407 [Map]; Strand: c
      • AT1G70540.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily protein
        Distance: -523; Region: promoter
    Flanking Genome Sequence: ET13623 - 3-prime edge
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACTCATG 
    AGTTAGAACG AAAACTACTA ACGAAGATTA CTTAAAACTT TTTTTTTTGG
    TCCGGGCAAG AGGAAAAAAA CATTTTTTGG CCCCCCCCAA AAAAACTGGG
    ATTGAGAAAT GGGGGCCCAA AACCTTTAGG CCTAACTTTC TAAAAGGGGC
    AAAAATAAAA AAATTGGCCA ACCTTAAAAG CCCCAATTAT CATGAATTGG
    GGAAAAAAAT AAGGCCTTTT TGGAAGTTGA TTCAATGGCC AGGGGCGGGC
    CCTTACCAAC CTTTGGCAGA AAACATAAAC CCCCAAAGGG AAGGGAATCT
    TTAAATTGGA GTTTTTCCAA ACAAAGCCAA AATAAAAATA AGAAGGGAAA
    AACCCCTCCT TAGGCCCAAT TAACCCAGGA ACCAAATTTG AAAGGGCCCC
    CCAAATATTC CCCGGGGAAA ATTTTTTGAA ACCTTTTTCC CCCAAAAAAC
    TTACTAAAAT TACCCCTTTT TTCTTTTAGG GGAGGGCTTA TTAAAAAAAA
    CAACCCCCCC CCATTTGGTC AAAAAAACAA AAACCGGGGG TCAAAAACCC
    CCCAATTTTA CAAAAAAAGG GCTAAAAAAT CCCCCCTTGG CCCCGGGGGG
    AACCCCCCCC CCCTGACCCG GAGCCAAAAG GGGGGA
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26593351 [Map]; Strand: c
      • AT1G70540.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily protein
        Distance: -579; Region: promoter
    Flanking Genome Sequence: ET13623 - 5-prime edge
    TCCTACTTTC TCCCTGCTCA TGAGACTATG GAAATGAGTC TCGTTTGGGG 
    TTATTGATGC TAACATATGA ATTTATTGTT CTAGTTTGAT GTATAAAGAT
    TTTGACAAAT TACACTCACG ACGAGAGTGG CTTGATTATC GTTTCATTAA
    AAAATTATTT AATTCAAAAG AGTAATAGTG GTGGTTATGG GTGGAGAAGG
    TGCGATTAGT GGCCAGTGCT CACACAACTA AACATAAGTC AAAGCTTTCA
    TCATTATATA ATTGCCAACA AATTCTAATA TCTTGAAAGT TGAAACTAAT
    TAACTAACGT GTAGAACAAG CTCGAGATTA TTCGTTTCGT CAATCCGAAG
    AAAAAAAATC TTAGAACGTC GCTTAATGGT AGACTCAAAA TGCATCATTT
    CGTCAATAAA CAACAAGAAG AAAAATACAA CACAACATCG CTATCACTTC
    AGAACATGGT TTAGCTTGTA CTGAAAAGAT AAGAGTTTAA TATTCTTAGA
    ATGACATGAC TTCGAAATAG ATCTCAATCA ATGTAAGGAT TTTGTTTTTG
    CGATAAGATA TTAATGCAAT GATATAGCAT GGGTTGGATA TTTCATATTT
    GGAGTTGACG CTGACTTTGA TAGTCACGGG TTGGTCGCTT TGCTTCTAGA
    CGTCGAGGAC CCATCGGTTT CTATTATTTT CGTTTTTCTA AATAAAATTC
    GCCGAGAATT ATCTGGTACC AATAATTTCA CAAATTTATG TAAATTTTTA
    AGACAATTAT TTTCTAAGAT CTATCTGCCT GATTGAAAAA TAACGAAACA
    AAACACTGTT TCATTAGTTC ACAAAAACGT AATTTT

AT1G70540.1

Model type
Protein coding
Short Description
Plant invertase/pectin methylesterase inhibitor superfamily protein
Computational Description
embryo sac development arrest 24 (EDA24); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: polar nucleus fusion; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G23350.1); Has 67 Blast hits to 67 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR