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ET13624

CSHL Arabidopsis genetrap mutant lines

Original: ET13624

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13624

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 923920 [Map]; Strand: c
      • AT1G03710.1 - [+] show detail - Cystatin/monellin superfamily protein
        Distance: 0; Region: exon2 (CDS)
      • AT1G03710.2 - [+] show detail - Cystatin/monellin superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13624 - 3-prime edge
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTACATGACG 
    GGGCGTGACT ACATGGAGAT TATGGCCAAT GTGGCTATTG ACAAATACAA
    CCAAGTAGAG GCTAGTACTA CTACTACTAC TACTACTCTT TTTAGTTTTT
    TTTTGTGTCA TCATTATATC TTCCCGATAA GTAGAGGCTA TATGAAACTT
    GTTTATTTTA TTGTAGAATA AGACGTTAAA GCTTGATCAT ATCGTGAGGG
    TGACGGTGCA ATTGAGCTAT GGATACAAAG CTTATATTAC ATTCATCTCA
    CTCGACA
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 923840 [Map]; Strand: c
      • AT1G03710.1 - [+] show detail - Cystatin/monellin superfamily protein
        Distance: 0; Region: exon2 (CDS)
      • AT1G03710.2 - [+] show detail - Cystatin/monellin superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13624 - 5-prime edge
    GTTTGGCTTG AAGAAGGGGG CATCCAGATC GAGAGGGCGT ATTCCGTAAC 
    AAACATGTTT AGGAAGCTTA TCCACTTTGA AACCCTGTAA CCACCGCACA
    AAGGTTCAAG CTTTATACCA AGATTGATGG AGAGCAGATC TAATTTTACG
    ACAAACCTTG CTCTCGTGGT AATAGCGCGT GTATCGACGA AACTCCAATT
    CCTCATCATC CTCAGGAGGC TCATCAGGCG ACTCGTAGTC TGAGCCTTCG
    AAACTATCGA AACCCCAAAC CTGGTCATCG CTTTCACTGT TTCTCTCCTC
    TTCCTCGCAT CCTTCATCGG AATCCGCCGG CTCAATCGTT TCGGCCTTGC
    GTTTCAAAGA GAGATCTGCG TCCATCACCT CGGGCTCAAC CGTATCGACA
    TCACTGGATT TGGGATCCAT TTTTTCCCCA ATTTCAAAAA CCCTAGAAAT
    TCTGAAAAAC TAGTTTGAGA AGAAGAAAAG TTTCGTGGTG GAATGAATGA
    TTGGCTAACC CTTAGTAAAA AGATTTGGTT GGCCCCCCAA ATCAATAGAA
    AATTTAATTG TTGGGCTAAG TAAATTAACA TTCTATTTTG TACCAATAAA
    TAAAAGAACA ACCTATGACT ATAACAAGAG CGATGGAAAA ACGACAACCC
    CTTGTGAGGT

AT1G03710.1

Model type
Protein coding
Short Description
Cystatin/monellin superfamily protein
Computational Description
Cystatin/monellin superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin (InterPro:IPR000010), Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381), Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT4G03565.1); Has 113 Blast hits to 103 proteins in 7 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G03710.2

Model type
Protein coding
Short Description
Cystatin/monellin superfamily protein
Computational Description
Cystatin/monellin superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin (InterPro:IPR000010), Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381), Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT4G03565.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR