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ET13626

CSHL Arabidopsis genetrap mutant lines

Original: ET13626

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13626

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22277981 [Map]; Strand: c
      • AT3G60260.3 - [+] show detail - ELMO/CED-12 family protein
        Distance: 833; Region: intergenic
      • AT3G60270.1 - [+] show detail - Cupredoxin superfamily protein
        Distance: 48; Region: intergenic
    Flanking Genome Sequence: ET13626 - 5-prime edge
    TTGATGTACG GTGTGCTTAA TTAGATATTC CCGCAACAAT TGCCTCGATC 
    TATTTTTGGT CTTGGTCTTT CGAACTAGTC CATCATGAAG TGCTCTTCTT
    GTGTGTAATA AATTATTTTC TTCATCAATA CTTTTTTGCT TATTGTTATC
    TTTACTCGAT CTCTTTTGTT CTATTACTCA TGGTCGTAGC ACAGCGTTAT
    CGTTATCATG TTCTACATGC TTATTGAGTA CAGTACAAAT TAATCTTAGA
    TTCCGGTTCC TTCCTCTTGG AACAATATTT ACCGTTCGAA TTTTGGGACA
    TAAGGAAATA CAAGTTGTCT TATATCTAAG CCAAATTAGA GCGTCAAAGG
    ACGGCTTAGA GAGATTAGAA AACCAAATCG TATAAAGAAA GAGACGTTGT
    ATTAAATTAA CCCGTTTGTA AATTGTAAGA TATATATATA TATAGTCATC
    TCAACTTGTA TTTTTTGAAT AACAAGTTTA TTTCCAACAG CAACATTATA
    TTTGACTAGT GTGAAATACA CATTTTGGCG GACCCGGTTA TTATATGGAC
    TGGTAAAAAT TGAACTA

AT3G60260.3

Model type
Protein coding
Short Description
ELMO/CED-12 family protein
Computational Description
ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT2G44770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G60270.1

Model type
Protein coding
Short Description
Cupredoxin superfamily protein
Computational Description
Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: uclacyanin 2 (TAIR:AT2G44790.1); Has 2285 Blast hits to 1861 proteins in 153 species: Archae - 3; Bacteria - 173; Metazoa - 13; Fungi - 54; Plants - 1712; Viruses - 73; Other Eukaryotes - 257 (source: NCBI BLink).
Link
InterPro Scan - TAIR